| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2334 |
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| Symbol | |
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| ID | 5539815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3010976 |
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| End bp | 3012634 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894467 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001432435 |
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| Protein GI | 156742306 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.769724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AACAAAAAAC CGTTGTCGCC GCTGCGCTCG GCGAATGTGT GCATGTTGCC
GGCGTGATGA ACTTTCTGCG CCTGGCGGAA GAAGCCGGCT GGCGCACGGT CTTTCTGGGT
CCGGCCACGC CGATTGAGCG GGTGCTCGAA GCCGCGCGAC AGGAGCAGGC CGATCTGGTT
GGCGTGTCCT ACCGCCTGAC GCCGGAAACC GGCGCGCATC TCCTGGGGCG TTTCGCCGAA
GCGGCAGACG ATCTGCATGC CGCAGGGGTG CGTTTCGCCT TCGCCGGAAC GCCGCCGCTG
GCGGAGAAAG CCGCCACGCT CGGTTTCTTC GAGCAGGTGT TCGATGGCAG CGAACCGGCC
GATCAGGTTC TGGCATATCT CAGGGGGCAA AATCCGGCAC ACGCAACCGA GGCGGATTTT
CCGCAACGCA CCGTTGACCG CATTCGCTGG AAAGCGCCAT TTCCCCTGAT CCGTCATCAC
TTTGGTCTGC CGACGATGCA GGCGACCATC GATGGCATTG CGCGCATCGC CGAAGCGCGC
TGTCTCGATG TGATTTCGCT CGGCACCGAT CAGGACGCCC AGGAGAACTT TTTCCGCCCC
GAACGTCAGG ACCCGGCGCG TACCGGCGCC GGCGGCGTGC CGGTGCGTAG CGCCGACGAC
TATCGCGCCC TCTACGCTGC CAGTCGACGT GGCAACTACC CGCTTATGCG CACCTACTCC
GGCACTGATG ATTTCGTGCG CCTGGCAGAG TTGTATGTCG AAACGATCAA CATCGCCTGG
TGCGCCATCC CGCTCTTTTG GTTCAACCGC ATGGACGGGC GCGGACCGTG GGACCTGGAA
GGGTCGATCC GCGAACATCA GACGATTATG CGCTGGTATG GCGAGCGGGA CATTCCGGTT
GAACTCAATG AGCCGCACCA TTGGGGCATG CGCGATGCGC CCGATACGGT CTTTGTTGCC
AGCGCCTATC TCTCGGCGTA CAATGCGCGC GCGTTCGGCG TGCGCGACTA TATCGCGCAA
CTGATGTTCA ACAGCCCGCC CGGTTTGTCC GATGCCATGG ACCTGGCAAA GATGCTGGCG
GTGATCGAGA TTACTGCGCC GCTGGCAGGA CCGGATTTCC GCATCTGGAA ACAGACCCGC
ACCGGGTTGC TGAGTTACCC GGTTGATCCG GCTGCGTCGC GGGCGCATCT TTCGGCAAGC
ATTTACCTGC AAATGGCGCT GCGTCCGCAC ATCATTCACG TCGTTGGGCA TACCGAAGCG
CACCATGCTG CCACCGCCGA TGATGTGATC GAAGCATGCG GCATAGCTCG CCGCGCTATT
GAAAACGCGC TGCGCGGGCA ACCCGACATG ACCGCCGATC CGTCCGTGCG CGCGCGAGCG
GCGCAACTGG TCGAAGAAAC CCATCTCCTC CTCAATGCGA TGGCGCAACT TGCGCCTCCC
GGCGTGACCG ACCCGCTGAC CGACCCCGCC ACACTGACGA AAGCCGTGGA GATTGGACTG
CTCGATGCTC CGCAATTGCG CAATAACCCG TTCGCACCGG GTCGCGTCGC AACCCGCTTC
ATCAACGGCA TGTGCCTGGC CGTCGATGCG CAGGGACGCC CGCTCGACGA GAAAGAACGC
ATCCGACTGG CGCTGGATCA TGCAACAATG TCAGCCTGA
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| Protein sequence | MTEKQKTVVA AALGECVHVA GVMNFLRLAE EAGWRTVFLG PATPIERVLE AARQEQADLV
GVSYRLTPET GAHLLGRFAE AADDLHAAGV RFAFAGTPPL AEKAATLGFF EQVFDGSEPA
DQVLAYLRGQ NPAHATEADF PQRTVDRIRW KAPFPLIRHH FGLPTMQATI DGIARIAEAR
CLDVISLGTD QDAQENFFRP ERQDPARTGA GGVPVRSADD YRALYAASRR GNYPLMRTYS
GTDDFVRLAE LYVETINIAW CAIPLFWFNR MDGRGPWDLE GSIREHQTIM RWYGERDIPV
ELNEPHHWGM RDAPDTVFVA SAYLSAYNAR AFGVRDYIAQ LMFNSPPGLS DAMDLAKMLA
VIEITAPLAG PDFRIWKQTR TGLLSYPVDP AASRAHLSAS IYLQMALRPH IIHVVGHTEA
HHAATADDVI EACGIARRAI ENALRGQPDM TADPSVRARA AQLVEETHLL LNAMAQLAPP
GVTDPLTDPA TLTKAVEIGL LDAPQLRNNP FAPGRVATRF INGMCLAVDA QGRPLDEKER
IRLALDHATM SA
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