Gene Rcas_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2333 
Symbol 
ID5539814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3009451 
End bp3010239 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID640894466 
Productpurine phosphorylase family 1 
Protein accessionYP_001432434 
Protein GI156742305 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2820] Uridine phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.323089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA ATGATCGCCT CTATCACATC GGGTTTGGGC GCAGCGATCT GGGCGACGAT 
CCGCCGCGCA TCGCGCTGCT GAGCGGCGAC CCGGAGCGCG CGCGCCTGAT CGCGCAGACG
GCGCTCCGCG GTGCGCGCGT TCTCTCGGAG AATCGTGGGT TGCACAGTTC TGTCGGAACG
CTGCCAAACG GCGCGCCGAT CCTTTCGGCA ACCAGCGGCA TGGGTGCGCC GTCGCTTAGC
ATTGTAGTGA ATGAACTCGT GCAGGTCGGC GTTCGCACCA TCATCCGCGT CGGCACCAGC
GGCTCGATCC AGCTGCACAT TCCGCCGGGG AGCATTGTCA TTTCCAGCGC CGCACTGTGT
CGTCAGGGCG CCGCCGACGA CATCGCGCCG CGCGAGTTCC CGGCTGCCGC CGATCCGTTC
GTCACCGTCG CGCTTATCGA AGCCGCGCGC GCCGCAGGGG TCGAGTATTT CGCTGGCGTG
ACGGCATCGG TGGATACCTT CTACGAAGGG CAGGAGCGCA CCGGCTCCGC CAATCCGCAC
CTGCTGCGCC GGTTGCGCGG CATTACCGAC GAGTACCGCC GCCTGAACAT CCTCAACTAC
GAAATGGAAG CCGGCACGCT GTTCAAAATG GGGCTGGTCT ACGGATTTGC GGCTGGATGC
GTCTGCGGCA TAGTTGCGCA GCGCACTGCG AGTGAAGCGA TCATCGTCGA ACGCAAGGCG
GTCGCCATTG AACGCGCGAT TGCTGTAGCC GTGCGCGCCG CAATCGCGCT GACCGCATCC
CCTGCCTGA
 
Protein sequence
MNGNDRLYHI GFGRSDLGDD PPRIALLSGD PERARLIAQT ALRGARVLSE NRGLHSSVGT 
LPNGAPILSA TSGMGAPSLS IVVNELVQVG VRTIIRVGTS GSIQLHIPPG SIVISSAALC
RQGAADDIAP REFPAAADPF VTVALIEAAR AAGVEYFAGV TASVDTFYEG QERTGSANPH
LLRRLRGITD EYRRLNILNY EMEAGTLFKM GLVYGFAAGC VCGIVAQRTA SEAIIVERKA
VAIERAIAVA VRAAIALTAS PA