Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2333 |
Symbol | |
ID | 5539814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3009451 |
End bp | 3010239 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894466 |
Product | purine phosphorylase family 1 |
Protein accession | YP_001432434 |
Protein GI | 156742305 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.323089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCA ATGATCGCCT CTATCACATC GGGTTTGGGC GCAGCGATCT GGGCGACGAT CCGCCGCGCA TCGCGCTGCT GAGCGGCGAC CCGGAGCGCG CGCGCCTGAT CGCGCAGACG GCGCTCCGCG GTGCGCGCGT TCTCTCGGAG AATCGTGGGT TGCACAGTTC TGTCGGAACG CTGCCAAACG GCGCGCCGAT CCTTTCGGCA ACCAGCGGCA TGGGTGCGCC GTCGCTTAGC ATTGTAGTGA ATGAACTCGT GCAGGTCGGC GTTCGCACCA TCATCCGCGT CGGCACCAGC GGCTCGATCC AGCTGCACAT TCCGCCGGGG AGCATTGTCA TTTCCAGCGC CGCACTGTGT CGTCAGGGCG CCGCCGACGA CATCGCGCCG CGCGAGTTCC CGGCTGCCGC CGATCCGTTC GTCACCGTCG CGCTTATCGA AGCCGCGCGC GCCGCAGGGG TCGAGTATTT CGCTGGCGTG ACGGCATCGG TGGATACCTT CTACGAAGGG CAGGAGCGCA CCGGCTCCGC CAATCCGCAC CTGCTGCGCC GGTTGCGCGG CATTACCGAC GAGTACCGCC GCCTGAACAT CCTCAACTAC GAAATGGAAG CCGGCACGCT GTTCAAAATG GGGCTGGTCT ACGGATTTGC GGCTGGATGC GTCTGCGGCA TAGTTGCGCA GCGCACTGCG AGTGAAGCGA TCATCGTCGA ACGCAAGGCG GTCGCCATTG AACGCGCGAT TGCTGTAGCC GTGCGCGCCG CAATCGCGCT GACCGCATCC CCTGCCTGA
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Protein sequence | MNGNDRLYHI GFGRSDLGDD PPRIALLSGD PERARLIAQT ALRGARVLSE NRGLHSSVGT LPNGAPILSA TSGMGAPSLS IVVNELVQVG VRTIIRVGTS GSIQLHIPPG SIVISSAALC RQGAADDIAP REFPAAADPF VTVALIEAAR AAGVEYFAGV TASVDTFYEG QERTGSANPH LLRRLRGITD EYRRLNILNY EMEAGTLFKM GLVYGFAAGC VCGIVAQRTA SEAIIVERKA VAIERAIAVA VRAAIALTAS PA
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