Gene Rcas_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2329 
Symbol 
ID5539810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3005881 
End bp3006480 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID640894462 
Producthypothetical protein 
Protein accessionYP_001432430 
Protein GI156742301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.419941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAA TTGCCGACTG TCATCATTCT GGCATATATC CAATGAGCAA TCCGGGACAC 
ATCGATATCG GCGGCGATGC CACGCACTCC ATTTTGATCA CCGGCTCGCA CAATGTAATC
CAGATCGGGC AGGCGGCGGC GCAGGCGCGT TCCGCCGGGT GTGACCCGGC GCAGATGCTG
CGCGTCGCGG CGATCCTGGC GGCGCCGGTC TTCGACCCGC GCGACCACAA TCGCCCACCT
GCACTCCTCG ATCTGCGCGC CGAGTGGGCG CGGCTGGCGC GTGCCATCCA TGACGCCCAC
GCTCCCACTC TCCTTACCCG CCTTGTTCCG CCAACCCTCG CCACGCTCCG TCGTGAACTG
TCGCCGCGTG TGGCGGAGCA GGGCCTCTTT CCGCATGTGT TGCACGTGAG CGGGCGCGCC
TGGGCGCAGG GGCTGCTGCT GGAAGAGGTA ACACTATGCT ATAATCATCC ACATACCCTT
TTATCTTCGG ACCCTTGTGG GGGTAGCATT GTATGTCAAT CGATCGCGAA CAACTACGCG
ACCTCATCTT GCAAGAACTA CCGGCGCTCT TCGAGCGGGA TCCAGAATTG CAGCGCTTGA
 
Protein sequence
MSVIADCHHS GIYPMSNPGH IDIGGDATHS ILITGSHNVI QIGQAAAQAR SAGCDPAQML 
RVAAILAAPV FDPRDHNRPP ALLDLRAEWA RLARAIHDAH APTLLTRLVP PTLATLRREL
SPRVAEQGLF PHVLHVSGRA WAQGLLLEEV TLCYNHPHTL LSSDPCGGSI VCQSIANNYA
TSSCKNYRRS SSGIQNCSA