| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2326 |
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| Symbol | |
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| ID | 5539807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2997320 |
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| End bp | 2999758 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894459 |
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| Product | peptidase C1A papain |
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| Protein accession | YP_001432427 |
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| Protein GI | 156742298 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.706763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.190341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCG TCGCACTCTT CCGCAGACTG GCCAGCGCCT GCACATTCCT GGTCATTATC
GCCGCCGGGG TGCTCACCCT TCCATCGGCG GTTCGATCAT CACCGAATGA CATTATTGTC
ACCCTGGCGC ACCACGGAAC CAGCGTCGCC GTCGCCGAGG GGCAGCGCCT GATCGTCAAA
CTCGAAGGGC AACCTGGAAC CGGCTACGGC TGGGAACTGA AAGAACCTTC ATCGTTGTTA
CAGACGAGCG ATCCGGTGTT CGAGCCACTG TCCGCTTCGT CCGCCGCCGC CACGAGCGCG
CCGATGGTTC AGGCATTCAG ATTCACGCCG GTGCGCGCCG GCAGCGAAAC CCTCACCCTC
GTCTACCGTC GTCCGTGGGA GCGCCAAGCC GCTCCGCTGC GCACCTTCAC CATCCAGGTC
GAGACCACTG GACGATTCGC TGCTCCGTCG CCATCCGCGC AGACTGCCGC CCTGCCGCAG
TCGCTTCCGC CAGTAGCGAT GGGATCAGAC GAAGGGTTGC CGGCGGCATT CAACTGGTGC
GAGCAGGGAA TCTGCACTCC TGTGAAGGAT CAGGGCGGAT GCGGCTCTTG CTGGGCATTC
GCCACTGCTG GCGTCGTCGA GTCGGCGATC AAGCGCATCG ATGGAGTCGA GCGCGACCTC
TCCGAACAGT ACCTGCTGTC GGCAGGGACC CACGGCGGCT GCGACGGCGG CATGCCCGCC
TATGATCTGT TCATCGGTGC GACTCCCGCG CATCAGACTG AAGCAGGCGT CGTGTACGAG
AGCGACCTGC CGTATACCGG GCAGGATGCG CCGCTTACCC GCGCATTGCC GCATCACGAG
CGCATGCTGG CGTGGAACTC GCTGTTCAAT GCCGATGTGG CGACGATCAA ACGCATCATC
CGCGAGCATG GTCCGGTATC CGCGTATGTG TGCGCCGGGT CGCGTTTTAT GTGGCACCGA
TCCGGCGTGT TCGAGACCGA CGAATCCGCC GCGTGCAACG GCAGCATCAA CCATGCCGTC
GTGCTGGTGG GTTGGGACGA CAGCAAAGGA ACCAGGGGGG CGTGGCGACT GCGCAACTCG
TGGGGGGCGA CATGGGGCGA GAACGGATAT ATGTGGATTG GTTACGGCAT ATCGGGTCTT
GGTCAGTGGA TCGATTATGT ATACTACGAC CGACTGGAAC CAGGCGCATA TGCTATCTCC
GGTCGTGTGC GGGAGCAGTG GCATGGAACC GCTGGCGTCA GCGTCTCGGA CGGTTCACGC
AGCGCCATTA CCGATCAGTA TGGCGTGTAT GTATTGAAGA ACGTATCGCC GGGAACGTAC
ACCCTCACTC CATCGCGCAG CAACGCCGCC TTCTCGCCCG CAACACGAAC CGTGACAGTT
GGGAACGGGA AAAATGCCGG CAATCAGAAC TTTGCGCTGC TGGCAACCTA CCGCATCAGC
GGACGAGTAA CCGGCAGTTT CGGCGAAGGT CTGCCCGGCG CGCGCGTCTC GGACGGAACG
CGCAGCGCCG TCACTGATGC GAATGGAAAC TACGTGATCG AAGGCGTGCT ATCGGGCGCA
TATGCTCTCA CTGCTTCACT GAGCGGCTAC ACCTTTACCC CCAACCCGCT CTGGGTGGTT
GTCAACAGCG ATGTCGGCGG ACAGGATTTC ACGGTGGTGT GCTCCTCCTG CACCATCAGC
GGCAGGGTGG TCGATAGCGC GGGCAATGGC GTGGCAGGGG CGACCATCTC CGACGGGATG
CGCAGCGCCA CAACGAACGC GCAGGGGTTC TATACCCTGA TCAGCGTTCC ACCGGGAACA
TACACCCTGA CCCCATCGCA CAGCGACTAC ATCTTCACGC CATCGGCGCG ATCAATCACG
GTTAACCGCC ATCTGAGCGA CCAAAACTTC ACCGCGATAT GCGCTTCCTG CTCCATCAAC
GGGCAGGTGA CCGACAACGC AGGGAACGGT GTCGCCGGAG TAACCATCTC CGACGGCGCG
CGCAGTGTGA TGACCGATGC TCAGGGACGC TATGCGCTGA CGAATGTGCC GCCAGGCGTC
GCCACACTCG TTGCTACCCG CAACGGCTAT GCCTTTAGCC CGTCAAGCCG CTCGCTCACG
GTCGACCGCC ATCTGAGCGG GCAGGATTTC ACGGCGATCC CTGCACCCTA CACCGTGAGT
GGACGGATCA CCGACAGCGC CGGCAATGGC ATCGGCGGCG TGACCGTCTC CGATGGCGCG
CGCAGCGTTG TCACCGATGG GAGCGGCGTC TTTACCCTGC GCAACATTCC AGCCGGGACG
TACACGCTCA CGCCGTCGCA TGGCAGCGAC ACATTTACAC CCGCAAACCG CACAGTTACC
GTCACCGGCG ACATAAGCGG ACAAGATTTC GCGCTTGCGT CGCCGGCGCC CGCAGCGCCT
GCGGACTACA CCGTCTTTCT GCCGCTGACC GTTCGCTAA
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| Protein sequence | MLIVALFRRL ASACTFLVII AAGVLTLPSA VRSSPNDIIV TLAHHGTSVA VAEGQRLIVK
LEGQPGTGYG WELKEPSSLL QTSDPVFEPL SASSAAATSA PMVQAFRFTP VRAGSETLTL
VYRRPWERQA APLRTFTIQV ETTGRFAAPS PSAQTAALPQ SLPPVAMGSD EGLPAAFNWC
EQGICTPVKD QGGCGSCWAF ATAGVVESAI KRIDGVERDL SEQYLLSAGT HGGCDGGMPA
YDLFIGATPA HQTEAGVVYE SDLPYTGQDA PLTRALPHHE RMLAWNSLFN ADVATIKRII
REHGPVSAYV CAGSRFMWHR SGVFETDESA ACNGSINHAV VLVGWDDSKG TRGAWRLRNS
WGATWGENGY MWIGYGISGL GQWIDYVYYD RLEPGAYAIS GRVREQWHGT AGVSVSDGSR
SAITDQYGVY VLKNVSPGTY TLTPSRSNAA FSPATRTVTV GNGKNAGNQN FALLATYRIS
GRVTGSFGEG LPGARVSDGT RSAVTDANGN YVIEGVLSGA YALTASLSGY TFTPNPLWVV
VNSDVGGQDF TVVCSSCTIS GRVVDSAGNG VAGATISDGM RSATTNAQGF YTLISVPPGT
YTLTPSHSDY IFTPSARSIT VNRHLSDQNF TAICASCSIN GQVTDNAGNG VAGVTISDGA
RSVMTDAQGR YALTNVPPGV ATLVATRNGY AFSPSSRSLT VDRHLSGQDF TAIPAPYTVS
GRITDSAGNG IGGVTVSDGA RSVVTDGSGV FTLRNIPAGT YTLTPSHGSD TFTPANRTVT
VTGDISGQDF ALASPAPAAP ADYTVFLPLT VR
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