Gene Rcas_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2324 
Symbol 
ID5539805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2995568 
End bp2996209 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID640894457 
Productphosphoglycerate mutase 
Protein accessionYP_001432425 
Protein GI156742296 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0703569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA TCATCATCCG CCACGGCGAG AGCGTGTGGA ACCGCGAAGG TCGCTACCAG 
GGGCAGATGG ACGCGCCGCT TTCCGAACTC GGACTGCGCC AGGCGGAAGC GCTTGCCGAA
CGCCTGCGCA ACGAACCGCT CGACGCCATC TTCACCAGCC CATTGCAACG CGCAGCGCGG
ACCGCCGAAG CGATCGCGCG CTACCATCCG AATGTGCCGT TGCTCACCTC ATCGGCACTG
CTCGAAATTC ACCACGGCGA GTGGCAGGGT CTGCTGGTGG ACGAGGTGAT TGAGCGCTAC
AGCGAGGGGT TGCGCGAATG GCGCCAGCAT CCAACGCGCG CGCAAATGCC GGGAGGTGAA
AGTTTCAGCA ATGTCCTCAA GCGCGTGCTC GACTTCAAAG AATGGTTGCT CCGTGAGTAT
CATGAACGCA CCGTGCTGGT TTCGACCCAC GACGTCGTGG TGAAGATTCT GGTCGCCGAT
GCGCTTGGGA TGAATATGGA CCGGATCAAC CGCATTTGGG TGACCAATGC CAGCATCAGC
GTCGTCGAAT ACGGCGACGA TCTGCCCTAT CTCGTGAGCC TGAGCGAGGC GTGTCACCTT
GGCCGGCTCG AAGTCGCACG CGAGAACCAG AAGGCGCTGT AA
 
Protein sequence
MRLIIIRHGE SVWNREGRYQ GQMDAPLSEL GLRQAEALAE RLRNEPLDAI FTSPLQRAAR 
TAEAIARYHP NVPLLTSSAL LEIHHGEWQG LLVDEVIERY SEGLREWRQH PTRAQMPGGE
SFSNVLKRVL DFKEWLLREY HERTVLVSTH DVVVKILVAD ALGMNMDRIN RIWVTNASIS
VVEYGDDLPY LVSLSEACHL GRLEVARENQ KAL