Gene Rcas_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2321 
Symbol 
ID5539802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2992108 
End bp2992665 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID640894454 
ProductFHA domain-containing protein 
Protein accessionYP_001432422 
Protein GI156742293 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.380377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAG CGCTCGTCCT TACCGCCATC ACCGGCACTC AGATCGGCAG ACGCTACACC 
GTCAGCGAGC GCGTCAACAC CATCGGCAGC GGACCACAGT GCAATGTGAC GCTCAATGAT
CGCCATCTCC AACCGCGTCA TGCCGAGATA CGCCAGATGT TCGACCGCTG GTTCATTGTT
CCGCTCGCGC CTGGCGGCAT TTCACTCAAC GGCGCGCCGG TGAGCGGGCA GAGTCGCCTC
AACCCCGGCG ACCAGTTGAC GCTGGGCGGC ACGACCTATC GAATCTCATA CGAGGAGTTG
GAAGAGCGCG CGCTTGGCAC AGCCGCTGAG ACGCAGACAC AGAGCGTTCC CCGGCTAGGG
GAGTATTTCG TCCGGCGCGG CATTCTCACG CCAGAGCAGG TGGCGCGGGT CGTCCAGCGC
CAGCGGGATA TGCAGTCGAG CGGCGTGACG TTGCCATTCG GACAGATCGC CTACGAGATG
GGATTGATCA ACCGGGCGCA GCTCGAACAG GCGTTAAACG AACAGCGCAA CGACTTCCAG
GCGCACTTTC ACGACTGA
 
Protein sequence
MVKALVLTAI TGTQIGRRYT VSERVNTIGS GPQCNVTLND RHLQPRHAEI RQMFDRWFIV 
PLAPGGISLN GAPVSGQSRL NPGDQLTLGG TTYRISYEEL EERALGTAAE TQTQSVPRLG
EYFVRRGILT PEQVARVVQR QRDMQSSGVT LPFGQIAYEM GLINRAQLEQ ALNEQRNDFQ
AHFHD