Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2315 |
Symbol | |
ID | 5539796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2984225 |
End bp | 2985001 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894448 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_001432416 |
Protein GI | 156742287 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.911593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACA TGACGATACA CGACGCGGTC GCCTTCTTCC GTGTACTCGC CGACCCGACG CGCTGCGCCA TTCTTGTGCG CCTGGCGCGG AGCGATGAGC GCCCAACCGA ACTGAGCAAT GCTCTCAAAC AGCCACTCGA AACCATCGCT GCCGCGCTCG CCGACCTGGA GTCTGCCGGA CTCATCACCT CGCGCCCCAG CGATGCTGGC GGCGAACGTT ACTACCACCT CGATCTGGAA CGATTGCAGC AGCGATATGC GCAGGCAGGC GGAACGATCC ATCCAGCGCT TGCGCAGGCT ATCGCCGGGA TCGAAGAGGA GAGCGCTCCG CGCCCCAAAG CGCGCGTTCT GTTTCTCTGC ACGCACAACA GCGCGCGCTC GCAAATGGCG GAAGGGCTGA TGCGCGCTTT CAGTCACGGC TCGATTGAGG TGTTCAGCGC CGGCAGCGAG CCCGGTCCGG TGCATCCTCT GGCAGTCGAG ACGATGGAGG CGATGCGCAT CGACATTCGC AACCAGCGAT CCAAGCACTA CGAGGAGTTC ATCGGTCAAC ACTTCGATTA TGTCATTACG GTTTGTGACC GCGCACGCGA GACGTGTCCC GTCTTTCCGG GCTTGAAGGA GTCCATTCAC TGGAGCATTC CCGATCCGAC AACCGTTGAG GACGAGACGG AACAGCGTCG CGCCTTCCAC CAGGCTGCCA CACAACTGGC AAATCGTATT CGGTACCTCC AGATATTGAT TGAGCGTGGC CAGAACACCC AATCGGTCAG ACGTTGA
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Protein sequence | MMDMTIHDAV AFFRVLADPT RCAILVRLAR SDERPTELSN ALKQPLETIA AALADLESAG LITSRPSDAG GERYYHLDLE RLQQRYAQAG GTIHPALAQA IAGIEEESAP RPKARVLFLC THNSARSQMA EGLMRAFSHG SIEVFSAGSE PGPVHPLAVE TMEAMRIDIR NQRSKHYEEF IGQHFDYVIT VCDRARETCP VFPGLKESIH WSIPDPTTVE DETEQRRAFH QAATQLANRI RYLQILIERG QNTQSVRR
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