Gene Rcas_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2315 
Symbol 
ID5539796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2984225 
End bp2985001 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID640894448 
ProductArsR family transcriptional regulator 
Protein accessionYP_001432416 
Protein GI156742287 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.911593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA TGACGATACA CGACGCGGTC GCCTTCTTCC GTGTACTCGC CGACCCGACG 
CGCTGCGCCA TTCTTGTGCG CCTGGCGCGG AGCGATGAGC GCCCAACCGA ACTGAGCAAT
GCTCTCAAAC AGCCACTCGA AACCATCGCT GCCGCGCTCG CCGACCTGGA GTCTGCCGGA
CTCATCACCT CGCGCCCCAG CGATGCTGGC GGCGAACGTT ACTACCACCT CGATCTGGAA
CGATTGCAGC AGCGATATGC GCAGGCAGGC GGAACGATCC ATCCAGCGCT TGCGCAGGCT
ATCGCCGGGA TCGAAGAGGA GAGCGCTCCG CGCCCCAAAG CGCGCGTTCT GTTTCTCTGC
ACGCACAACA GCGCGCGCTC GCAAATGGCG GAAGGGCTGA TGCGCGCTTT CAGTCACGGC
TCGATTGAGG TGTTCAGCGC CGGCAGCGAG CCCGGTCCGG TGCATCCTCT GGCAGTCGAG
ACGATGGAGG CGATGCGCAT CGACATTCGC AACCAGCGAT CCAAGCACTA CGAGGAGTTC
ATCGGTCAAC ACTTCGATTA TGTCATTACG GTTTGTGACC GCGCACGCGA GACGTGTCCC
GTCTTTCCGG GCTTGAAGGA GTCCATTCAC TGGAGCATTC CCGATCCGAC AACCGTTGAG
GACGAGACGG AACAGCGTCG CGCCTTCCAC CAGGCTGCCA CACAACTGGC AAATCGTATT
CGGTACCTCC AGATATTGAT TGAGCGTGGC CAGAACACCC AATCGGTCAG ACGTTGA
 
Protein sequence
MMDMTIHDAV AFFRVLADPT RCAILVRLAR SDERPTELSN ALKQPLETIA AALADLESAG 
LITSRPSDAG GERYYHLDLE RLQQRYAQAG GTIHPALAQA IAGIEEESAP RPKARVLFLC
THNSARSQMA EGLMRAFSHG SIEVFSAGSE PGPVHPLAVE TMEAMRIDIR NQRSKHYEEF
IGQHFDYVIT VCDRARETCP VFPGLKESIH WSIPDPTTVE DETEQRRAFH QAATQLANRI
RYLQILIERG QNTQSVRR