Gene Rcas_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2312 
Symbol 
ID5539793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2980904 
End bp2981734 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content60% 
IMG OID640894445 
Productmethyltransferase type 11 
Protein accessionYP_001432413 
Protein GI156742284 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC ACTTCTCATC ATCGGAAACG ATCAAAGACC AGGTGCGTGA TCACTACGCC 
CAGCGCATTC AATCCGGCAC GTGTTGTGGT CCGTCGTCTG GATGGTGTGA CAACAGCACA
CCGACCGAGA TTGCGCTCTA CGGCGCCGAG ACGGTTGCAG CATTGCCCCA GGGGTTGACC
TCGTTTGGCT GTGGCAACCC GGTTGCGCTG GCATCGCTGC GCATGGGCGA GGTGGTGCTC
GACCTGGGAT CGGGCGGCGG GCTTGACGTG CTCCTGGCAG CGCAGCGTGT CGGCGCCACG
GGGTATGTCT ACGGTCTCGA CATGACCGAT GAGATGCTGT CAGTGGCGCG TCGCAATGCG
GAAAGGGCAG AAGCGACCAA TGTCGAGTTC CTCAAGGGTG ATATCGAGCG CATTCCGCTC
CCCTCGAATA CGGTCGATGT CATCATTTCC AATTGCGTGA TCAATCTCAC GCCGGACAAA
GCGCTCGCCC TGGGCGAAGC GTTCCGTGTC CTCAAACCGG GCGGACGGCT GGCGATTTCC
GATATTGTGA TCGATGGCGA TCTGAGCCGG TTTCCCGTCA CCGAGGGACA GATCCGCGCG
GCGCTGAGTT GGACGGGGTG CATCGCCGGC GCATTGACGA TAGAGGAGTA TCGTACATTG
CTCAGCGATG CCGGATTTAC CGATAGTGCC GTGACGGTAC AGCACCGTTA CACAATCGAC
GATTTACCTT CCGATGCGCC TCTCGATCTG GCAACGATCC CGGCGGATGT GCTGAATGGT
CTGGCAGGAT GTTTTACGAG CAGCGCAATC ACCGCGCGAA AGCCGGAGTG A
 
Protein sequence
MTHHFSSSET IKDQVRDHYA QRIQSGTCCG PSSGWCDNST PTEIALYGAE TVAALPQGLT 
SFGCGNPVAL ASLRMGEVVL DLGSGGGLDV LLAAQRVGAT GYVYGLDMTD EMLSVARRNA
ERAEATNVEF LKGDIERIPL PSNTVDVIIS NCVINLTPDK ALALGEAFRV LKPGGRLAIS
DIVIDGDLSR FPVTEGQIRA ALSWTGCIAG ALTIEEYRTL LSDAGFTDSA VTVQHRYTID
DLPSDAPLDL ATIPADVLNG LAGCFTSSAI TARKPE