Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2308 |
Symbol | |
ID | 5539789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2976530 |
End bp | 2978377 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894441 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
Protein accession | YP_001432409 |
Protein GI | 156742280 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.945813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACAAA TGCCCGACAC TGAAATCCAG CCACGTCCGC TTGATCGCCC GGCATCCGAA CCTATCGTGA ACGACTTTTC GATCGTCGCA GCGACGGTCA ACGGTTCGGG CAGCCAGACG GCGAACAATG TGCTGATGCG CGCCATCTTC AAGATGGGTG TGCCGGTCAG CGGCAAGAAC CTCTTTCCAT CGAACATTCA AGGGCTGCCG ACCTGGTTCA CCATTCGCGT CAGCAAAGAT GGCTACACAG CCCGGCGTGA GACGACCGAA ATCCTGGTTG CCTTCAATCA GCGCACTGCC GATGAGGACC TGGCATCGCT CGTTCCCGGC GGCGTCTGCG TTCATCCGAA CGATATTACT TTCACCAATC CGCGTTCCGA TGTTTCGTTC TATCCGCTGC CGGTGCGCGA CCTGGTCAAA CAATCCGGTG TGGATGCAAA ACTGCGTGAT TACATCGCCA ATATGGTCTA TGTCGGCGCT TTGGCGGAAC TGCTGAGCAT CGACATGAAC GAGATCAAAG CGGCGCTCGA ACGCCATTTC AAAGGCAAAG CCAAACCGGT CAGTCTGAAT TATGGCGTTG TAGTTGCGGC TGCCGAATGG GTGCGCGCCA ACCTGCCGAA GACCGATCGG TTCCAGGTAG CGCCGATGGA CAAAACGCAA GGTCTGATCC TGGTCGATGG GAATACTGCC GCAGCATTCG GCGCACTGAT GGGGGGAATG ACCGTGTGCG CCTGGTACCC GATCACTCCC TCGACTAGCC TGGTTGATGC CATGACCGAA CTAGCGCCAA TCCTGCGCGC CGATCCTGAG ACGAATACAA CGACCTATGC CATTATCCAG ACGGAGGACG AAATCGCGGC TGCCGGGATC GTGGTCGGTG CGGGATGGGC AGGCGCGCGC GCGATGACCG CCACCTCCGG TCCGGGTCTA TCGCTTATGA ATGAGTTCGT GAGCCTGGCA TACTTTGCCG AGGTTCCCTG TGTCATCTGG GATGTGCAGC GCATGGGACC GAGCACCGGT CTGCCGACCC GCACCTCGCA GGGCGATGTT CTGTCTGCCT ACTACATGGG GCATGGCGAT ACCCATCATG TCATCCTGTT CCCCGGCAGC ATGATCGAGT GCTTCGAGTT TGGCTATCTG GCGTTCGACC TGGCGGAGCG CTTGCAGACT CCGGTGTTGG TGTTGAGCGA TCTCGATCTG GGTATGAACA ACTGGATGTC CGAGCCGTTC ACCTATCCCG ATAGACCGCT TGACCGCGGC AAGGTGCTGA GCGCTGATGA GTTGGAGAAA TTCAAGGATT GGGGACGCTA CAAGGATATC GACGGCGATG GGATCCCCTA TCGCACGTTG CCGGGCAATC CCAACCCGCG CGCGGCATAC CTGGCGCGTG GCACCGGGCA CAATGAATAC GCGATCTATA GCGAACGCCC ACAGGACTGG CAGAGAAATC TGGATCGCCT GACGCGCAAG CACAACACGG CGCGCACCCT TGTGCCAAAG CCGGTGGTGC AGGAAGCCGA AGACGCAACC ATCGGAATTG TCGCCTATGG CTCGACCGAC CCGGCGGTGC GCGAGGCATG CGATATGCTG CGCGCACGGG GTATTACGGC AAGTTATTTG CGCATTCGCG CGCTGCCGCT GGAAGCGACA CTGACCGACT TCCTGGCGAA GTATGAGCGG GTGTATGTCG TGGAATTAAA CCAGGATGGT CAGATGGCGC AACTGGTGCA GTTGCACGCG CCGGAGTACG CAGCGCGCAT TCGCCCGATC CATATCTGCA ATGGTTTGCC GATGAGCGCA CAATTCGTGG TGGACTCGAT TGTGAGCGCC GAGCATCCCG TAACGTGA
|
Protein sequence | MIQMPDTEIQ PRPLDRPASE PIVNDFSIVA ATVNGSGSQT ANNVLMRAIF KMGVPVSGKN LFPSNIQGLP TWFTIRVSKD GYTARRETTE ILVAFNQRTA DEDLASLVPG GVCVHPNDIT FTNPRSDVSF YPLPVRDLVK QSGVDAKLRD YIANMVYVGA LAELLSIDMN EIKAALERHF KGKAKPVSLN YGVVVAAAEW VRANLPKTDR FQVAPMDKTQ GLILVDGNTA AAFGALMGGM TVCAWYPITP STSLVDAMTE LAPILRADPE TNTTTYAIIQ TEDEIAAAGI VVGAGWAGAR AMTATSGPGL SLMNEFVSLA YFAEVPCVIW DVQRMGPSTG LPTRTSQGDV LSAYYMGHGD THHVILFPGS MIECFEFGYL AFDLAERLQT PVLVLSDLDL GMNNWMSEPF TYPDRPLDRG KVLSADELEK FKDWGRYKDI DGDGIPYRTL PGNPNPRAAY LARGTGHNEY AIYSERPQDW QRNLDRLTRK HNTARTLVPK PVVQEAEDAT IGIVAYGSTD PAVREACDML RARGITASYL RIRALPLEAT LTDFLAKYER VYVVELNQDG QMAQLVQLHA PEYAARIRPI HICNGLPMSA QFVVDSIVSA EHPVT
|
| |