| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2302 |
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| Symbol | |
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| ID | 5539783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2968600 |
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| End bp | 2969469 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894435 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001432403 |
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| Protein GI | 156742274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.418685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTACG AACTGGTGCA GTCATTGACC AGCGGACTGC TGATCGGCAG CGCACTGGCA
GTATTGAGTG TCGGTTTCAG CATGGCATGG GGCATCACGC ATGTACTCAA CGTTGCACAT
TGCGCCTTTG CCGTGCTGGC CGCCTACCTC GGCTACTGGT CGCTCAACCG GTGGGGGATC
GACCCGCTTC TGGCGCTGCC GGTGATGCTG CCGCTATTCT TTCTGCTTGG CATGGCGATG
CATACGCTGC TAATCCGCGC AACCGCGCGA CGCGCCCACG ATCTGGGGCT GGCGACGATG
GTGCTGACCT TCGGGTTGGG CGTGGTGATG GAAAACGGCA TGCAACTCGC CTGGACGCCC
GATCCGCGCG TGTTGAAGAC CGCGTATAGC AGCCTCACTT TCACCCTTGG TCCGCTCATT
GTGCAGGCGC CGCACCTGGT GGCATTCGGT CTGGCAGGAT TGACGATTGG CGCACTCTAT
CTGTTCGCCG AACGGACGTT CATGGGCAGG GCGGTACGCG CTGTCTGGCA GCAACCGATG
GGCGCGGCGC TGTCGGGGAT CGATCTGGAT CGGGTGACGA CCATCGCCTA TGGTCTGGCT
GTTGCCACTG CGGCGGTTGG CGGAGTGGCG ATGTCGTTGC TCTACACCTT CGACCCCGCT
TCACATCTGA GCTGGCTGGT GTATGTGTTT CTGGTGGTCA TTCTGGGCGG AGTTGGCAGT
ATTCTGGGGT CGGCGCTCGC CGGTTTGATC ATCGGGTTGA TCATCGGCGC CAGTAGTGTC
TTCATTCCGC TGGCGTGGAA CAATCTGGTG TTGTTTGGAT TGCTGATTGT GTTGCTGCTC
CTGCGCCCGC AGGGTTTGTT GCAGCGGTAG
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| Protein sequence | MGYELVQSLT SGLLIGSALA VLSVGFSMAW GITHVLNVAH CAFAVLAAYL GYWSLNRWGI
DPLLALPVML PLFFLLGMAM HTLLIRATAR RAHDLGLATM VLTFGLGVVM ENGMQLAWTP
DPRVLKTAYS SLTFTLGPLI VQAPHLVAFG LAGLTIGALY LFAERTFMGR AVRAVWQQPM
GAALSGIDLD RVTTIAYGLA VATAAVGGVA MSLLYTFDPA SHLSWLVYVF LVVILGGVGS
ILGSALAGLI IGLIIGASSV FIPLAWNNLV LFGLLIVLLL LRPQGLLQR
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