| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2294 |
|---|
| Symbol | |
|---|
| ID | 5539775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2960847 |
|---|
| End bp | 2961806 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640894427 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432395 |
|---|
| Protein GI | 156742266 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.24692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.213826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATA CGACTATCCA CCCCCCGCGT CCATCCGAAC CGCCACCATC CGATGACCCG
TTCCGCTATG GGTGGCGCTT TGTGCTACGT CCGACCCCCG ACGATCCCCA TCACCTTGAA
CAGGTTCCGC TTACGCTGGA AGATGTCCTG CACCCTGAAA CGGGAGATTT CATCGTGCAC
AGCGATCGCC ACGAGACCGA CCGGATGTAC CTCACTGCTG TGCTGCGCGC GCGCCTTGAG
GGGGCGGGAG CGGCCATTGT CCTGAGCGAT GTGCGTATCG CCTGGGATAT TCCCGACTTG
CGCCCGCACG GACCGGACGT GATGGTGATA CCGGGCATCG TGGAACGCCA AAACTGGAGC
ACATTCGATG TAGCGGTTGA AGGCGCGCGT CCGGCGCTGA TCATCGAAAT CACCTCGCCG
GAAACGCGCG AGAACGACCT GGAGCGCAAG GTAGAGCACT ATGCGCGAGC AGGAGTAGCG
CAGTATGTGA TTGTGGACGA CACAGGTCGC GGTCGGGAGC GACATCTGCG CCTGCTCGAC
TATCGGTTGG AGGCGGGGGC ATATCGGTTG CACCCGCCAG ACGCGGCAGG GCGAGTGCAT
CTGGTGATTG CCAACCTGTG GCTGGGTATC GAGCGGGATC ACGTCGTCTG CTACAACGAG
CGCGGCGTTG CGTTCGGCGA CTATGCAACG GTGGTGCGGC AGGCAACTGA AGCCGAAGAA
CGCGCGCAGC GAGAAGCCGT AGCGCGCGAG GCCGAAGCGC AGGCGCGACG CGAAGCCGAG
AAACGTGCGC AGCGAGAAGC CGTAGCGCGC GAGGCCGAAG CACAGGCGCG GCTTGCAGCC
GAGGAACGCG CGCAGCGAGA AGCCGTAGCG CGCGAGGCCG AAGCACAGGC GCGGCTTGCA
GCCGAGGAAC GGCTGCGCGC TCTGGAAGAA GAATTGCGCC GCCTGCGCAA CAATGCGTAG
|
|---|
| Protein sequence | MTHTTIHPPR PSEPPPSDDP FRYGWRFVLR PTPDDPHHLE QVPLTLEDVL HPETGDFIVH
SDRHETDRMY LTAVLRARLE GAGAAIVLSD VRIAWDIPDL RPHGPDVMVI PGIVERQNWS
TFDVAVEGAR PALIIEITSP ETRENDLERK VEHYARAGVA QYVIVDDTGR GRERHLRLLD
YRLEAGAYRL HPPDAAGRVH LVIANLWLGI ERDHVVCYNE RGVAFGDYAT VVRQATEAEE
RAQREAVARE AEAQARREAE KRAQREAVAR EAEAQARLAA EERAQREAVA REAEAQARLA
AEERLRALEE ELRRLRNNA
|
|---|
| |