Gene Rcas_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2288 
Symbol 
ID5539769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2952581 
End bp2954896 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content62% 
IMG OID640894421 
Productserine/threonine protein kinase 
Protein accessionYP_001432389 
Protein GI156742260 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000513908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTCAC CCAACCAGAT TCTTCAAGGA CGGTACCAGA TCATCGAGCC GATTGGCCGC 
GGTGGCATGG GTGCAGTGTA CAAGGCGATG GACCTGCGCT TGCACGCGAT TGTCGCTCTG
AAGCAGACGC TGGTTTCCGG CGATGCGCCG CGACGGGCGT TCGAGCGTGA AGCGCAGTTG
CTCGCCGGGT TGCGCCACGC GGCGTTGCCC AAAGTCAGCG ATCACTTTGT CGAGGATGAT
GGTCAGTTCC TGGTCATGGA GTTTATCCCC GGCGACGATC TCGGTTCGCT TTTGAGCAAA
CGTGAAGGTC CGTTTCCGGT TGCCGATAGC CTGCGTTGGG CGGATACACT GCTCGATGCG
CTGGAATATC TTCACGGTTA CACGCCACCG ATCATCCACC GCGACATTAA GCCGCAAAAT
CTGAAACTCA CCGACCGCAA TGAGATCATT CTGCTCGATT TCGGTCTGGC GAAGGGCGCT
GCCGCTGCAA TGACCCGCTC GGCGTCCACA GCCAGCGTCT TTGGCTACAC ACCGCACTAC
GCGCCACTCG AGCAGATTAA GGGCACGGGC ACCGATCCAC GCAGCGATCT CTACTCGCTC
GGAGCAACGC TCTATCATCT GCTGACCGGC GCTCCGCCTC CAGATGCGCT TACCCGCGCG
GCTGCCGTCA TCAATGGGGA GCCGGATCCG CTCGTTCCTG CCAATCAGCA GAATCCTGCT
GTTAACCCCG CGATTGCAGC CGTCCTGATG CGTGCAATGG CGCAGCGCCC CGACCAGCGA
TACCAGTCGG CAACGGCGAT GCGCGCAGCG CTGCGTGATG CAGCGCGCGG CGGCGCTGCC
GCAACAGTGT TGCTCGATGA AGCGTCGCCA ACGGTGGTGC GCCTTGCCGA TACTTCGCAC
CAACAAGCGG CGTATGTTGA CGCTGGGGCT ATGTCAGTCG GTTCGGCGCC GCAGGTGGTG
ACCAGTACGA CGCAAAAGAA GATCGCTTCC GCGCCGCCGG CATCGGCTGC CCGTCCTGGA
TGGTTGTGGC CCCTGATCGG CGTCGTGGTT CTGGCGCTGG CGGTGATTGG CGGCTTCTTC
GCCTTCGGCG GCGGTAGAGC GCCTCAGCCG CCTGCACAAA CGACGCCTGG CGGTGCTGTG
GCGGCTGAGT CCACCAATGT GCCGACAATG ACACTGCTGC CAACTGCTGC GCCATTGGAC
AACGAGCAAC TCTTGCAAAC TGCTGTCGTG CTGCAAACGG CGGAAGCCGA ACGGCGCACG
GCGGAAGTCG CAACTGCGCG CGCGATTGTC AATCAGGTCG ATAGCGCCAA TACGCAAACG
GCTATCGCGC TCCAACCCTC GCCGACTGCG CTGCCTCCGA CTGATACGCC CGCGCCGACC
GATACCCCGG CGCCGACCGA TACGCCCCGT CCGACGAATA CGCCCCGCCC GACAAATACG
CCCCGCCCGA CGAATACGCC CGATCCGAAC GTGCCGACGC AGACGCCAAC GCCTGTTCCG
TCCGGTCTCA CAACCGCACC CGCCGGTCCG ACCGGCGTCG TGATCGGCAT TGGCGGCAGC
GGCGATCTGT TCCGCGGCGC TGCGCGACGC GGCACGATCG ATCCGGCGAA TAGCGAAGGA
GGATCGTGCA TCCAAGGGCG CGTCGTTCAG GCGAACGGCA GTCTGTTCCA GAGTTTCTAT
GTGCAGGTGG ACAATCGCGG TAGAACGATT CCGGCGAAGC ATTTCTACGA TACCGGCAAC
TACCGCATCT GTGGGCTTGG CGAAGGCGAG TGGGGCATTG CTGTGTATGC CGTCAACAAT
AAGCCAACCA CTCCGGCGGA GCAGTCCGGT CATCAGGTGC GGGTGCGCCT GAGCGGTCAG
CCAGGCGAGA TATTTTACGT TGATTTCACC GCGCGCCAGG ACTTGGTGGT GCCAACGGAT
GTTCCGACAC CGACACCTGA GCCGCCGACG CCAACACCGG AACCCAATCC ATATGATGGC
ATCTGGCGCG GCACCAACGC CGGCACGACG ACGACGGGCA ACTATCCACC CGGGCGCTTC
GAGATCGAGG TGCGCAACGG CGCCGTCTAC CGTGTGTCGG TTGATGGGCC ATCGTGTCCA
TTCGAGACCT ATCCGAACTT TCCGAATGGC ATCCGCATCA ATGGTAACGC CTTCGCTGTG
AGTGGTGTGG TCTTCAATCC GATTACTGGC GGCAATCCGA ATCATACCAT CAGCGTCAGT
GGGACGTTTG TGTCGGAGTC GCTGGCAAAC GGGTCGCTCT CTGCGCAACT CGATGGCGTG
CCGTGCGCCA ATGCCACATG GAGCGCACGG AAATAG
 
Protein sequence
MLSPNQILQG RYQIIEPIGR GGMGAVYKAM DLRLHAIVAL KQTLVSGDAP RRAFEREAQL 
LAGLRHAALP KVSDHFVEDD GQFLVMEFIP GDDLGSLLSK REGPFPVADS LRWADTLLDA
LEYLHGYTPP IIHRDIKPQN LKLTDRNEII LLDFGLAKGA AAAMTRSAST ASVFGYTPHY
APLEQIKGTG TDPRSDLYSL GATLYHLLTG APPPDALTRA AAVINGEPDP LVPANQQNPA
VNPAIAAVLM RAMAQRPDQR YQSATAMRAA LRDAARGGAA ATVLLDEASP TVVRLADTSH
QQAAYVDAGA MSVGSAPQVV TSTTQKKIAS APPASAARPG WLWPLIGVVV LALAVIGGFF
AFGGGRAPQP PAQTTPGGAV AAESTNVPTM TLLPTAAPLD NEQLLQTAVV LQTAEAERRT
AEVATARAIV NQVDSANTQT AIALQPSPTA LPPTDTPAPT DTPAPTDTPR PTNTPRPTNT
PRPTNTPDPN VPTQTPTPVP SGLTTAPAGP TGVVIGIGGS GDLFRGAARR GTIDPANSEG
GSCIQGRVVQ ANGSLFQSFY VQVDNRGRTI PAKHFYDTGN YRICGLGEGE WGIAVYAVNN
KPTTPAEQSG HQVRVRLSGQ PGEIFYVDFT ARQDLVVPTD VPTPTPEPPT PTPEPNPYDG
IWRGTNAGTT TTGNYPPGRF EIEVRNGAVY RVSVDGPSCP FETYPNFPNG IRINGNAFAV
SGVVFNPITG GNPNHTISVS GTFVSESLAN GSLSAQLDGV PCANATWSAR K