| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2277 |
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| Symbol | |
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| ID | 5539758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2934626 |
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| End bp | 2937370 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894410 |
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| Product | peptidase C11 clostripain |
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| Protein accession | YP_001432378 |
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| Protein GI | 156742249 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02806] clostripain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000811314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000350123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCCGT CGCCCCCGCC GCGAGGGTTC CAGGTTCCGC CAGCGCAACC GCAGTACCAG
CCGCCAGCAC AACCACAGGG ATTTCAGGTT CCGCCAGCGC AACCGCAGTA CCAGCCGCCG
CCAGCCCAGC CCGCGGCAGC GAAGCCGGCC CGCAAAGGGT GCCTGCCAAC CTGGGCGCTC
ATTCTTGGAT TGGTCGGCGT TGTGCTGGTC GTCGGCTGCA TTGGCGCACT CGTGGTGACC
GGCGCTATCA ATGTGCGGAT CGGTCCGACG CCGCAGAGCG GCAATGGAAC GCCTCAGAGC
GGGAGCACAA CCGACACGAC GCCCCAGAGT GGCGGCACGG TTTTGCCGAC ACCGACCCGC
GCGCCGGCGC AGACTGCGCA ACCGGCGGGT GACAGGGCTG CCTGGACGGT CCTGGTCTAT
CTTGATGGCG ATAACAATCT GGAGCGGGAC GCGGTGATCG ACTTCAACGA AATGGAACTC
GTTGGATCCA GCGATCAGGT CAAGATAGTT GTCCTGTTTG ACCGCATCGG CGCCGCCGCG
CCATGGGACG ACGACTCGAA CGGCAACTGG GAGACCACCA AACGTTTTCT GGTGACTCAG
GATGATGACC CGAACACCAT TCGCTCGCAG GAACTGGACG ATCTGGGCGA ATTGAACATG
GGCGATCCGC AGACGCTGGT TGATTTTGCA GTGTGGGGGA TGCAGACCTA CCCTGCCGAA
CGGTACGCCC TCATTCTGTG GGACCATGGC GCATCGTGGG CTGGGATCGC CTTCGATGAC
ACCGATGGCG AAGATGGCAT TAACATGCCA GAACTCGACG CGGCGCTGCG GACGATTCAG
CAGCAGACCG GCAAACGCAT CGATCTGATC GGCTTCGATG CCTGTCTGAT GGCGCAGATC
GATGTGGCGC TCGTCACCGC GTCCTACGCC GATGTATTTG TCGCCTCCGC CGAACTCGAA
CCGAACACCG GCTGGCCCTG GGACCTTCTG CTGCGTCGCC TGATTGAGAA CCCACAACAG
GATGCAGCGG CATTCGGCGC CGCGATTGTC GAGTCCTACC GCGAGTTCTA TCAGCCACGC
GACGATCCGA CCGTAACTCT CTCGGCGTTC GACCTGACTC GCGCCGGTGA CCTGCGCCAG
AAGTTGAACG CGCTCTCCGA CGCCATGCTC ACCGGCATGG GTGAATCCTA CTCGGCGATC
GCCGAGGCGC GATCATTCGT CGATGTGTAC AGTCAGCCCT CTCCCGAAGA GTTCAGCGCC
GCCGATCTGG GGCACTTCGC CCGGCTCGTT GTGGACCGTG GGGCGCGTCC CGCCGTGGCG
GACCCGGCGC GCGCCCTCTA CGAGGCGATT GATCAGGCGC GCATCGCCGA ATGGAATGGC
GGTTTTCATG CTAACTCTAC CGGACTGTCA ATCTTCTTCC CGCAGTATGC GCAACTCTAT
CCGCCGATCT ATGGTCAGGG GGCATCGCCT CTGCCGCAGC AGACCTCGTG GGGCGACTTT
CTAAAGGCGT TCCATACTGC CAACACCGGT TTGCAGAGCG CTGCCGAGAT CGGTTCGCTC
ACTGTCTCGA ATACGACCGT GAGCATCGAT AGTCCGATCA CGGTCGAAGG AGTCGTCACC
GGCAACGATA TTGCCTATGT CTTCTTCTTC GCGGGTATTC CAAACAACGA CCGCAGCGGC
GTATTGCTCA CCAGCATCGA CTTCCTCTAT CCGCCGGGAA GCGTGCCGGG CAGCAGCGTT
CCTCCCTGGA CTGGCGGCAG CACACGGCTT AAGGTCAATT ACAGCGGCAC GCAATGGGGG
TTGACCAACG GACAGGATAC CATTCCGGTG CTGCTTGGTC CGGCGAAGTA TGGCACGGCG
CTGTATGGTG TTGAAGGGAT TTATACCGTC AGGAGAACCA ACGAGCGAAT TACCGCAGCC
CTGGTTTTCA ATGTCGAAAG TGGGACGCCT GAGTTGATCA CGGTCTATGG CTTTCCGAGG
AACCAGAAAC AGGAATCGCA GCCGTTCGAG ATCACACCGG TGCCAGGTGA CTCCTTTACT
GCCATGATCC GCACGTACAC TGTGAAAGGT GACCGCCTGG AACCCGGTTT CGTCGAAGGT
GATACACTCA CGATTGGCAA CCAGCCGCTC GCTGTGCAAC GCATCCCGAT GCAGAGCGGC
GCCTATGTCA CCGGCTTTCT GGTGCGCGAC ATCGCCGGAC GTTTCAGCTA CCAGTACGCC
GACATTAATG TGCGCAACAC GGGCGCTGGT GCAAACGTGC CTCCTCCAGT GCAGACATCG
CCCGGCACAC AGGCAGGGTA CCAATCGTAC AGCAACCCGA AACTCGGTTT CTCGATTGAG
TATCCGACAA CCTGGAAAAC GCTTGACACC GGCAATGACC AGATCTACTT CTACGATCCT
GCCGAAAACG GGAATGTCTT CGTCAGCATT GACGTGTACC AGACGGGGTT GACGCCATCG
GAAGCCAACC AGCGTTTGCT GGAGTTCTTC CTTGAGTCGC TTCAGACGCA GCAGAACTTC
CAGCAACGGC CCGGCGATCC GTTGCGGGTC AGCGGAGAAG TCGGACCTTC GGCGAGTTAC
CAGTACACCG ATCAGAATGG CATCACCTTT ACCGGCCTCG TCGTTGCCGT GAGCAGCCCG
CGCACCGGAC TGAGTTACCT GATATCGGTG CAGGCGCCTT CCACCGACTT CAACCGTCAC
GCAGAGACGC TTGGCGCCAT CGTCGACTCG ATGAAGATTG AGTGA
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| Protein sequence | MPPSPPPRGF QVPPAQPQYQ PPAQPQGFQV PPAQPQYQPP PAQPAAAKPA RKGCLPTWAL
ILGLVGVVLV VGCIGALVVT GAINVRIGPT PQSGNGTPQS GSTTDTTPQS GGTVLPTPTR
APAQTAQPAG DRAAWTVLVY LDGDNNLERD AVIDFNEMEL VGSSDQVKIV VLFDRIGAAA
PWDDDSNGNW ETTKRFLVTQ DDDPNTIRSQ ELDDLGELNM GDPQTLVDFA VWGMQTYPAE
RYALILWDHG ASWAGIAFDD TDGEDGINMP ELDAALRTIQ QQTGKRIDLI GFDACLMAQI
DVALVTASYA DVFVASAELE PNTGWPWDLL LRRLIENPQQ DAAAFGAAIV ESYREFYQPR
DDPTVTLSAF DLTRAGDLRQ KLNALSDAML TGMGESYSAI AEARSFVDVY SQPSPEEFSA
ADLGHFARLV VDRGARPAVA DPARALYEAI DQARIAEWNG GFHANSTGLS IFFPQYAQLY
PPIYGQGASP LPQQTSWGDF LKAFHTANTG LQSAAEIGSL TVSNTTVSID SPITVEGVVT
GNDIAYVFFF AGIPNNDRSG VLLTSIDFLY PPGSVPGSSV PPWTGGSTRL KVNYSGTQWG
LTNGQDTIPV LLGPAKYGTA LYGVEGIYTV RRTNERITAA LVFNVESGTP ELITVYGFPR
NQKQESQPFE ITPVPGDSFT AMIRTYTVKG DRLEPGFVEG DTLTIGNQPL AVQRIPMQSG
AYVTGFLVRD IAGRFSYQYA DINVRNTGAG ANVPPPVQTS PGTQAGYQSY SNPKLGFSIE
YPTTWKTLDT GNDQIYFYDP AENGNVFVSI DVYQTGLTPS EANQRLLEFF LESLQTQQNF
QQRPGDPLRV SGEVGPSASY QYTDQNGITF TGLVVAVSSP RTGLSYLISV QAPSTDFNRH
AETLGAIVDS MKIE
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