Gene Rcas_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2271 
Symbol 
ID5539752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2925105 
End bp2925800 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID640894404 
ProductFHA domain-containing protein 
Protein accessionYP_001432372 
Protein GI156742243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0933302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000132679 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTTTC TCCTGCTCAC AGGCGGTTTG ATCCTTATGC TCGCTGCGTG CGGCGCCCCT 
ACCGCCACAC GAGGCGACAC GTCCGTTCCC CCGGCGGGTG AGCCGTTGCT GCCATCGGCA
GCGCCGCTCC CCACCGGTGA ACCCGGGCAA AACCTGATAG CCGAACCATC GGCTTCACCC
GCTGCCGAAA CACCGGCAGC GGCGCCGTCT GTCGTAGACG CCGCGCCGGA AACTGCTGCA
ACGCCGGCGG CGCCACCTCC CACACCGCCG TCAACGGCTA CGATGGCGCC GGTCCCCTCT
CCTGCGCCAC AGTCCATGGT CACTGCGGCG CCGACCGTGT CACTTCCCGC GCCCCCGCCG
CAGGTCACAG CACTGACGCT GCCGACGCCG GAAGCGCAAC CGCCGCCGGT GAATATCGGA
GAGCAGGCGA TCCTCCCGGC GGACCTGCTC GCACGTCTGA TCGGTGACCT GTCGGTGCGG
AGCGGCAGCG ATCCGTCAAC GATCACACTG ATCGGCGCAG AAGCGGTGAT CTGGAACGAT
GGATCGCTCG GCTGCCCGCA ACCCGGTATG ATCTATCCGC AGGTGCAGAT CGAAGGGTAC
CGCGTTGTCC TGCGGGTCGG CGACCGCGAC TACGATTATC GCATTGGGAA AGGCGGTTCG
TTTGTGCTGT GCGAGCGTTC CACGCGCCAA CCCTGA
 
Protein sequence
MRFLLLTGGL ILMLAACGAP TATRGDTSVP PAGEPLLPSA APLPTGEPGQ NLIAEPSASP 
AAETPAAAPS VVDAAPETAA TPAAPPPTPP STATMAPVPS PAPQSMVTAA PTVSLPAPPP
QVTALTLPTP EAQPPPVNIG EQAILPADLL ARLIGDLSVR SGSDPSTITL IGAEAVIWND
GSLGCPQPGM IYPQVQIEGY RVVLRVGDRD YDYRIGKGGS FVLCERSTRQ P