| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2264 |
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| Symbol | |
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| ID | 5539745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2915250 |
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| End bp | 2917418 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894397 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001432365 |
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| Protein GI | 156742236 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000152914 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGTCA ATGAAGCAGT CAAACTGCGC AACAATCGCC TGGCGCAGTA CTACGGCATG
TTCACAGTTG GTCTGATTGT GTTCAGCCTG ATCATGGGCG CACTGGAACT CGGCGCCGGC
ATGCCGAAAG CATGGATCGG TTGGACGTTC CTGATGCTGA CGATGGGCAT GTATGCCTTC
ATCGGCATTA TGAGCCGCAC CAAAATCCTG GATGAGTACT ATGTCGCCGG GCGTAATGTG
CCTGCGGTGT TCAACGGCAT GGCGACCGGC GCCGACTGGA TGAGCGCGGC GTCGTTCATT
TCGATGGCGG GCACGCTCTA CGCGCTCGGT TACGATGGGC TGGCGTACAT CATGGGATGG
ACGGGCGGCT ATGTGTTGCT GGCGCTCCTC TTTGCGCCCT ATATCCGCAA GTTCGGTCAG
TATACCATTC CCGACTTTGT CGGTGCGCGC TACGGCGGGC GCTGGCCCCG GTTGGTGGCG
GCTATCTGCG CCATTATCGT CAGCCTGACG TATGTGACGG CGCAGGTGGT CGGCGTCGGC
ATCATCATGT CGCGCTTCAT CGGCGTGCCG TATGAGTGGG GCGTGGTGAT CGGTCTCTCC
GGCGTGCTCG TCTGTTCCTT CCTGGGAGGC ATGAAGGCGG TGACCTGGAC GCAGGTGGCG
CAGTATATTA TCCTGATCAT CGCCTATATG ATTCCGGTGA CCTTCCTCTC GCTCAAACTG
ACCGGTTTCC CCTTTCCGCA GTTGAGCTAC GGGCAGGCGC TGCAAAACAT CACTGTGCTG
GAGAAGGAGT TGAAGATCTC GTCCGAAGCG CCAGCGCGCG ATGGGACTGG ACGCATCATT
CAGCAGGGGT ATGTTCCTGC CTACAATGAA GGGCTGAGCA ACGCCGCTGC CGTAACGGCC
ATCAATCAGA TCAATTCCTA CTTTGGTCTG AATATTACCC CGCCGAAGGC GCAGTCGATC
CCCGATGCCA GCAAACCGGC TGATGAAATT CAGACTGACT GGCGCGGCAC GCCGTGGAAT
TTCCTGGCGC TGACATTCTG CCTCATGGTC GGCACCGCCG GGCTGCCGCA CATTCTGATC
CGCTTTTATA CGGTGCCAAG TGTGCGTGAG AGCCGCCTGA GCGTCGGATG GGCGCTGTTC
TTCATCTTCC TGCTCTACTT CACGGCGCCA GCGTATGCCG CGTTTGCGCG GTGGGAAATC
TTGCAGAACG TGGTCGGCAA GGAGATTAAG TCGTTGCCGG AGTGGACGGT CAACTGGAGC
CGCCTGGGTC TGATTACGCA GCGCGACTAT ACGACGCTCG ACGGGCGCGA GATTGATAAA
CTGCCGGCCT GGGCTGCGCC ACAGGTGAGA AGTGGTGCGC TGGTGATTAC CGACGCGAAT
GGCAACGGCA AGATCGATCT GGCGGGTGCG ACGTTTAGCG AGACCGAAGT CGATGGCAAG
AAAGTCGGCG TCTTCGGCGA GCTGTCGGGC ACCGCGGTTA CCAAGACCAG CACTGATGGC
ATTCTGCAAT TCGGTGAACT GAATATCGAC CCGGATACGA TTGTGCTCTC GACGCCGGAA
ATTGCCGGTC TGCCGTACAC GGTCGCGGCG CTGATTGCGG CTGGTGGTCT GGCGGCGGCG
CTCTCTACCG CCGACGGTCT GCTGGTGGTT ATTTCGTCCG CCATTGCGCA CGACTTCTAC
TATCGCATCA TTAATCCGAA AGCCAGTATG AACACCCGCA TCTGGCTCGG CAAAACGATG
CTCGTGGTCG CTGCGGTCAT TGCGGCGCTG CTCGCGTTGC CACGTCTGGC GCTGATTGCG
CAGATGGTGG CGTGGGCATT CTCGATGGCG GCATCGTCGT TCTTCCCGGT GGTGTTGCTC
GGCATCTTCT GGAAGCGCTG CAACGGTCCG GGCGCGATCG CCGGCATGGT TGGCGGCCTG
TCGGTGACGC TCTTCTATAT GTACAACAAC TACCTCGATC CATCGTTCAA TGTGCTGGGC
ATTACCCACC TGGCGGCGGG CATCTTTGGT ATGCCGATCA ACTTCCTCCT CTGCTACATC
GTCAGCAAAT TGACGGCGGC GCCGTCACAG GAGATTCAAG ACCTCGTCGA TCACCTGCGC
AGCCCGGAAC TCGATGATGA GTTGATGACC AGCATCGCAA GCGGCAAGCA GGCGGCTGGC
GCGCGCTGA
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| Protein sequence | MAVNEAVKLR NNRLAQYYGM FTVGLIVFSL IMGALELGAG MPKAWIGWTF LMLTMGMYAF
IGIMSRTKIL DEYYVAGRNV PAVFNGMATG ADWMSAASFI SMAGTLYALG YDGLAYIMGW
TGGYVLLALL FAPYIRKFGQ YTIPDFVGAR YGGRWPRLVA AICAIIVSLT YVTAQVVGVG
IIMSRFIGVP YEWGVVIGLS GVLVCSFLGG MKAVTWTQVA QYIILIIAYM IPVTFLSLKL
TGFPFPQLSY GQALQNITVL EKELKISSEA PARDGTGRII QQGYVPAYNE GLSNAAAVTA
INQINSYFGL NITPPKAQSI PDASKPADEI QTDWRGTPWN FLALTFCLMV GTAGLPHILI
RFYTVPSVRE SRLSVGWALF FIFLLYFTAP AYAAFARWEI LQNVVGKEIK SLPEWTVNWS
RLGLITQRDY TTLDGREIDK LPAWAAPQVR SGALVITDAN GNGKIDLAGA TFSETEVDGK
KVGVFGELSG TAVTKTSTDG ILQFGELNID PDTIVLSTPE IAGLPYTVAA LIAAGGLAAA
LSTADGLLVV ISSAIAHDFY YRIINPKASM NTRIWLGKTM LVVAAVIAAL LALPRLALIA
QMVAWAFSMA ASSFFPVVLL GIFWKRCNGP GAIAGMVGGL SVTLFYMYNN YLDPSFNVLG
ITHLAAGIFG MPINFLLCYI VSKLTAAPSQ EIQDLVDHLR SPELDDELMT SIASGKQAAG
AR
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