Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2261 |
Symbol | |
ID | 5539742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2912254 |
End bp | 2913546 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894394 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001432362 |
Protein GI | 156742233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00253326 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCGCATCC TCCATGTGGT TCAACTCTAT CATCCGGTGG CAAGCGGCGC GAGCCGCTAT TTCCGCGAGA TCGGCGAACG ACTCGCGGCG GAAGGGCATC GCGTGACCGT GCTCGCCACC GACGCCTGTG ACCTCGAACA TATCTGGATG CCGGGCCGCC GCCGCATCGA GACGCCGGTC GAAACGTTCA ACGGCGTGCA GATCGTTCGT CTGCCTATCC GCCGCCGTCC GGGACCGCCG ATCCTCTACC CGGCGCTGCG CCGCTTGATG ACCGAGATTT CGCGCCTGCC CGGCGCCGCG CCGCTGCTTC GTCGCCTGGC ACTGTGGACG CCACAGTGGC CCGGTGTCGA GGCGTTCTTC GCGCAGTACG GTCCGTTCGA CCTCGTGCAT GCGACCAATA TCACGCTCGA TTTCGCCATT CTGCCGGCAT ATGCGTATGC GCAGCAGCGC GGCATTCCAT TCATCTGCAC GCCATTCATG CATCTGGGAG AACCTGGAAG CCGCGCTATC GTGCGCTACT ACAGCATGCG CCATCAGATC GATGTGCTGC GCCAGAGTGA TCGAGTGATG GTGATGACCG GCGTGGAGCG TGATTTTCTG GCAGCGCGCG GTGTGCCACG CGAGCGGCTG CGAGTGGTTG GCGTCGGCGT GACGCCAGAA GAAATACAGG GGGGTGACGG TGCGCGGTTT CGTGCCGATC ACCGTGTCGA TGGACCGCTG GTGTTGTTCA TCGGCGCACT GGCATACGAC AAAGGCGCCC TTCATTTGAT CGAGGCGATG CAGCGTCTGT GGCGCGACGG ACATGCGGCG ACGCTGGCGC TCATTGGCGC ACCGCTGGCG CATTTCGACG CCTTCTATGC GCGTCTTCCG GCGGCGGATC GGATGCGCAT CCGCCTGCTG CCCTATGCTC CCGATGCAGT CAAGCGCGAC GCACTGGCGG CGGCGGATGT TTTTGCGCTC CCATCACGCA CCGACTCCTT CGGCATCGTG TTTTTGGAAG CCTGGTGCTA TGGCGTGCCG GTGATCGGCG CGCGCGCTGG CGGCATTCCC GATGTCATCA CCGATGGGCA GGACGGTCTG CTCGTGCGGT TTGGCGATGT TGCCGGGCTG GCGCAGGCGA TCCGTCTGCT GATCGGCGAC CGCGCGCTGG CGCAGCGGCT GGGCACAGCC GGGCGCGCCA AAACCCTGCG CGATCTGACG TGGGAGCGGG TCTATGCGCG AGCGCGCGCC GTTTATGCCG AGGTCGGCGG AGCGAATACG ACCGGCTGTT GCGCAACTTT TGGCGGAGCG TGA
|
Protein sequence | MRILHVVQLY HPVASGASRY FREIGERLAA EGHRVTVLAT DACDLEHIWM PGRRRIETPV ETFNGVQIVR LPIRRRPGPP ILYPALRRLM TEISRLPGAA PLLRRLALWT PQWPGVEAFF AQYGPFDLVH ATNITLDFAI LPAYAYAQQR GIPFICTPFM HLGEPGSRAI VRYYSMRHQI DVLRQSDRVM VMTGVERDFL AARGVPRERL RVVGVGVTPE EIQGGDGARF RADHRVDGPL VLFIGALAYD KGALHLIEAM QRLWRDGHAA TLALIGAPLA HFDAFYARLP AADRMRIRLL PYAPDAVKRD ALAAADVFAL PSRTDSFGIV FLEAWCYGVP VIGARAGGIP DVITDGQDGL LVRFGDVAGL AQAIRLLIGD RALAQRLGTA GRAKTLRDLT WERVYARARA VYAEVGGANT TGCCATFGGA
|
| |