Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2249 |
Symbol | |
ID | 5539730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2899967 |
End bp | 2900305 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894382 |
Product | ferredoxin-like protein |
Protein accession | YP_001432350 |
Protein GI | 156742221 |
COG category | [C] Energy production and conversion |
COG ID | [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0215756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTA TGAACCCCTA TGCGCGCCAT ATCTTTATCT GCACCGGGCG GTATTGCGAT CCATCGGGGA AGGCGACGCA CCTTTACACT CGCCTGGCGC GTCTGCTTGG ACCACTGGGC GCCTACGAGC ATCCCCGGCG GGTCAAACGA GGAACGTCGT CATGCCTGGG GGTGTGTTCC GGCGGTCCGA TTGTGGTGGT CTACCCCGAC GGAATCTGGT ACCACCATGT GGACGAAGCG GTGCTCGAAC GGATCGTGCG CGAGCATCTC GGGCAGAATC GCCCGGTGAC GGAGCACATG TTTCATCGCT TGCAGGGCGA AGGTAACGGT CGCACATAG
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Protein sequence | MPRMNPYARH IFICTGRYCD PSGKATHLYT RLARLLGPLG AYEHPRRVKR GTSSCLGVCS GGPIVVVYPD GIWYHHVDEA VLERIVREHL GQNRPVTEHM FHRLQGEGNG RT
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