Gene Rcas_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2249 
Symbol 
ID5539730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2899967 
End bp2900305 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content61% 
IMG OID640894382 
Productferredoxin-like protein 
Protein accessionYP_001432350 
Protein GI156742221 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0215756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTA TGAACCCCTA TGCGCGCCAT ATCTTTATCT GCACCGGGCG GTATTGCGAT 
CCATCGGGGA AGGCGACGCA CCTTTACACT CGCCTGGCGC GTCTGCTTGG ACCACTGGGC
GCCTACGAGC ATCCCCGGCG GGTCAAACGA GGAACGTCGT CATGCCTGGG GGTGTGTTCC
GGCGGTCCGA TTGTGGTGGT CTACCCCGAC GGAATCTGGT ACCACCATGT GGACGAAGCG
GTGCTCGAAC GGATCGTGCG CGAGCATCTC GGGCAGAATC GCCCGGTGAC GGAGCACATG
TTTCATCGCT TGCAGGGCGA AGGTAACGGT CGCACATAG
 
Protein sequence
MPRMNPYARH IFICTGRYCD PSGKATHLYT RLARLLGPLG AYEHPRRVKR GTSSCLGVCS 
GGPIVVVYPD GIWYHHVDEA VLERIVREHL GQNRPVTEHM FHRLQGEGNG RT