Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2231 |
Symbol | |
ID | 5539712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2879315 |
End bp | 2880424 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640894364 |
Product | DNA methylase N-4/N-6 domain-containing protein |
Protein accession | YP_001432332 |
Protein GI | 156742203 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0921492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000652955 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCACTAC CTTTAAATCA GATTATTGAA GGTGATTGTG TGGAAATACT GAATACGTTA CCAGAAACAT CCATTGACCT TATTTTTGCC GATCCTCCCT ATCATTTACA GTTACAAAAC GAACTTCATC GACCAAATAT GACGAAAGTG GACGCTGTCG ATGACGACTG GGACAAGTTC GAGTCGATGC AAGCGTATGA TGAATTTACT CGAACGTGGT TAACGGCGTG TAAGCGGGTC TTGAAACCAA CCGGCACCAT CTGGGTTATC GGAACGTACC ATAATATCTT TCGTGTTGGG GCCATGATGC AGGATTTAGG GTTCTGGATC CTCAATGATG TTATCTGGAT AAAACTAAAT CCGATGCCTA ATTTTCGTGG TGTCCGTTTT ACCAATGCCC ATGAAACCCT CATTTGGGCA AGTACCGGTA AAGATGCAAC ATATACGTTC AACTATTACG CGATGAAAGG GTTGAACGAT GAAAAGCAAA TGCGTTCTGA CTGGTGGCTT TTACCGTTAG CGACGGGATC GGAACGGGTA AAAAATGAAC ATGGCGATAA AGCCCATTCC ACCCAGAAGC CGGAGGCGTT ACTGTATCGG GTGATTTTGT CATCCAGCAA TCCCGGTGAT GTGGTGCTTG ACCCATTTTT TGGAAGTGGA ACAACGGGTG TTGTCGCGAA ACGTTTGCAT CGAAATTGGA TTGGAATAGA AAAGGAGAAA CGATATGTCC AGATTGCGCA AAAGCGCATT GACGCAATGC AGCCAGAGAT GTTTGACGCT GCGACGTTTG ATGTAAAGAG CAAAGCCAAA TCTGCTCCTA AAGTGGAGTT TTCGGTTCTG GTCGAACATG GGTATGTACA ACCTGGGCAA CGATTGTTTT TTGGAAAAGA CAAAACGAAA GTGGCCACAA TCAAGCCTGA TGCTCGGCTC CGTACTGCGG ACGGCTTCGA AGGCAGCATC CATCAGGCAG GTAGCCATTA CATGAACAAT GCGCCCTGTA ATGGGTGGGA GCATTGGTTT ATCGAAGTTG ATGGTCAAAT GATCAGTCTT GACGAAGTGA GAGAAAAGTT TCGGGTAGAC AAGGGGCTTT ACAATGAACG ATCAGGTTAA
|
Protein sequence | MPLPLNQIIE GDCVEILNTL PETSIDLIFA DPPYHLQLQN ELHRPNMTKV DAVDDDWDKF ESMQAYDEFT RTWLTACKRV LKPTGTIWVI GTYHNIFRVG AMMQDLGFWI LNDVIWIKLN PMPNFRGVRF TNAHETLIWA STGKDATYTF NYYAMKGLND EKQMRSDWWL LPLATGSERV KNEHGDKAHS TQKPEALLYR VILSSSNPGD VVLDPFFGSG TTGVVAKRLH RNWIGIEKEK RYVQIAQKRI DAMQPEMFDA ATFDVKSKAK SAPKVEFSVL VEHGYVQPGQ RLFFGKDKTK VATIKPDARL RTADGFEGSI HQAGSHYMNN APCNGWEHWF IEVDGQMISL DEVREKFRVD KGLYNERSG
|
| |