Gene Rcas_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2229 
Symbol 
ID5539710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2878365 
End bp2879030 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID640894362 
Producttype III restriction system methylase 
Protein accessionYP_001432330 
Protein GI156742201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0764738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00005113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCAC AGGTGAAATC GAAAAAACGG GTGACCGATT ACGGTGAGGT GCTCACGCCA 
AAGCACATCG TGGATGCCAT GCTCGACCTG GTTAAGCAGG AGACGGAGCG GATTGACTCG
CGCTTTCTGG AACCGGCCTG TGGAACCGGA AACTTTCTCA CGGAAATTCT GGAACGCAAG
TTAAGGGTCG TCGAGCAGCG CTACGGGAAG AGTCAGGTAG AATACGAGCG TTACGCGATC
CTGGCCGTTT CGTCGCTCTA CGGGATTGAC ATTCTGGCTG ATAATGTCGA AGAGTGCCGC
CATCGGCTGT TTGAGGTGTT TGATGTGGCC TACACCCGCC TCTTTGGAGA AAAGACGAAA
ACGCAGTGCC GGGAAGCGAT ACGCTTCATT TTGCGGCGCA ACATCATCCA TGGCGACGCG
CTTTCGTTGC AGACGGTCAC GGACCCGCCG CAGCCGATTA TTTTTTCTGA GTGGTCGCTG
GTCAATGGCA GTCTGCTCAA GCGGCGCGAC TTTGCCTTCC ATGAGTTGGT GAGCCATAGC
GCGATGCGAG AATTGCCCCT CTTCTCCGAC CAGGGCGAGG AGGTGTTCAT CCCGGAGCCG
GTGAAGGACT ATCCGCCGGT GCATGTTCTG GAGGTCGCCC ATGCCTACGA CGAACTACAA
CCCTGA
 
Protein sequence
MKSQVKSKKR VTDYGEVLTP KHIVDAMLDL VKQETERIDS RFLEPACGTG NFLTEILERK 
LRVVEQRYGK SQVEYERYAI LAVSSLYGID ILADNVEECR HRLFEVFDVA YTRLFGEKTK
TQCREAIRFI LRRNIIHGDA LSLQTVTDPP QPIIFSEWSL VNGSLLKRRD FAFHELVSHS
AMRELPLFSD QGEEVFIPEP VKDYPPVHVL EVAHAYDELQ P