| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2224 |
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| Symbol | |
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| ID | 5539705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2872099 |
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| End bp | 2872527 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894357 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001432325 |
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| Protein GI | 156742196 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00436859 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000299365 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAACAC CAGACCTTTC TCAACTCACA CGCAGCGGTC TTGCCGACCG GCTCGGCATT
CAGATCGTCG AACTGACACC GCAGCGGATT GTGGCGACGA TGCCGGTGAC GGCAGACCAT
CATCAACCGC TCGGCTATCT CCACGGCGGC GCATCGGTCG CGCTCGCCGA AACGGTCGCC
AGCATCGGCG CATTCTTCAA TTGTCCGCCG GGAAAGGCAG CCTTCGGTCT TGAGATCAAC
GCCAACCACA TTCGCCCCAA GCGCGAGGGG GTGGTGACTG CAATCGGCGC GCCGCTGCAC
GTCGGCAAAT CGACGCAGGT GTGGGAGGTG CGCATCGTCG ATGAGCAGGA GCGCCTGATC
TGCATATCGC GCTGCACCAT TGCAGTCGTC GATCTGGCAC AAACGATGGA ACGGGGATCA
CAGGCATGA
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| Protein sequence | MTTPDLSQLT RSGLADRLGI QIVELTPQRI VATMPVTADH HQPLGYLHGG ASVALAETVA
SIGAFFNCPP GKAAFGLEIN ANHIRPKREG VVTAIGAPLH VGKSTQVWEV RIVDEQERLI
CISRCTIAVV DLAQTMERGS QA
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