Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2209 |
Symbol | |
ID | 5539690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2852690 |
End bp | 2853955 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894342 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001432310 |
Protein GI | 156742181 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0688071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATTG CAATGCTCAG CGTTCATAGC AGCCCCCTCG CGCGTCTCGG AGGCAAGGAG GCGGGTGGCA TGAATGTGTA TGTTCGAGAA TTGAGCCGCG AGTTCGGACG GCGCGGCATT TCGGTCGATA TTTTCACCCG CGCGCAGGAA CGCACCGCGC CGGCGATCGT TCCGATCGAT CAGGGGGTGC GACTGATCCA CGTGCGCGCC GGTCCATCAG CCCCCTACGA CAAAAATCGT CTGCTGGACT ATTTGCCGGA GTTTATTGGG CGGGTGCGCT GCTTCGCCGA TAGTGAAGAC CTGCACTACG ACATCATCCA CAGTCATTAC TGGGTCTCCG GCGAAGCGGC GCTGGCGCTG CGCCGCAGTT GGGGCGCGCC TGTCGTGCAT ATGTTCCATA CCCTTGGCGC AATGAAAAAC CAGGTGGCGC GCGGGTCAGA AGAACGCGAG ACCAGGCAGC GAGTCGCTGT CGAGGGAGGC ATTCTGCGCG AGGCTGATAT GATCATTGCA GCAACGCCGC TCGACCGGGC GCAGATGGTC TGGCACTATA ACGCGGACGC AGAGAAGATC AGGGTTGTGC CGGCCGGTGT TGACCTGCGC CGCTTTCGAC CCCGCGATCT CGTGGAGGCG CGCGCGGCGC TCGATCTGCC GCCTCCCCCA CACCGCGTCG TCCTGCTGGT GGCGCGTATT GAGCCGCTCA AGGGGATCGA CGCGCTGATC GAAGCCGGCG CGCTGCTGCT GCAACGCCAC CCTGCGTGGT GCGGCGCGCT GACGACGCTG ATCGTCGGCG GCGGCGGCGA AGAGGAACGC GCGCAATGGA ACGCCGAGCA ACGGCGATTG GACGCGCTGC GCCAGCGGCT CGACATCGCC GATGTCGTTC ACTTCGCCGG AGCGCAACCG CAGGATCGTC TGCCGCTGTA CTATGCTGCC GCCGATGTTG TGACCATGCC GTCGCACTAT GAGTCGTTCG GAATGGCGGC GCTCGAAGCG CTGGCATGCG GCAGGCCGGT TATCGCCACG AATGCGGGAG GTCCGGCGTT CATTGTGGAA GATGGCGTGA GCGGGTTGTT GACCCCGCCA GCCGATCCGG TGACGCTGGC GCGGCATCTT GAGCGCCTGC TGCGGGACGA TGCCGGGCGT GCCGCTATGG GCGCTGCGGC GCGCGAACGC GCGTTGCGGT TCGGCTGGGA ACACGTCGCC TGCGATATTC TTAGCGTCTA TCGTGATCTC CTCCGGCAGC GCAGCGCATG GATGCGCGCA GGGTAA
|
Protein sequence | MRIAMLSVHS SPLARLGGKE AGGMNVYVRE LSREFGRRGI SVDIFTRAQE RTAPAIVPID QGVRLIHVRA GPSAPYDKNR LLDYLPEFIG RVRCFADSED LHYDIIHSHY WVSGEAALAL RRSWGAPVVH MFHTLGAMKN QVARGSEERE TRQRVAVEGG ILREADMIIA ATPLDRAQMV WHYNADAEKI RVVPAGVDLR RFRPRDLVEA RAALDLPPPP HRVVLLVARI EPLKGIDALI EAGALLLQRH PAWCGALTTL IVGGGGEEER AQWNAEQRRL DALRQRLDIA DVVHFAGAQP QDRLPLYYAA ADVVTMPSHY ESFGMAALEA LACGRPVIAT NAGGPAFIVE DGVSGLLTPP ADPVTLARHL ERLLRDDAGR AAMGAAARER ALRFGWEHVA CDILSVYRDL LRQRSAWMRA G
|
| |