| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2191 |
|---|
| Symbol | |
|---|
| ID | 5539672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2815871 |
|---|
| End bp | 2817208 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640894324 |
|---|
| Product | Na+/melibiose symporter and related transporter-like protein |
|---|
| Protein accession | YP_001432292 |
|---|
| Protein GI | 156742163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGGC TTCTCCGCTA CATTGCGTAT TCGATGGGCA ACTTCGCCAA CACAATCGCC
TATCAGGTGT TCGGAAACCG CATTCAGTTC TACTATGTCG ATGTGCTGGG ACTGAATGCA
GCGGCAGCCG GTGTGATCTG GACGATCTAT GGCTTGTGGA ACGCCATCAA CGATCCGCTC
ATGGGGCAAC TCTCGGACCG AACGCGCACA CCGATGGGGC GACGGGTGCC GTATGTCCTC
TTTGGCGCTG TGCCGCTCGG ACTCTCCTTC TTCTTCCTCT GGACGCCGCC AGGGCAATCG
CCGTGGTTGC TCGCCGCCTA TTTCCTGATC ATTCTGTTCA TCTTCGACAC CCTCTACAGT
CTGACAATCA TCGCCTACAA CGCGCTTTTC CCGGAAGTTG CGCCGCACCT GAAAGCGCGC
ATCGATCTCT CCGCCGTGCG TGAGGTGTTG GCAACGATTG CGCTCCTGCT TTCCTTCATC
CTCGCGCCGA TCCTGGCGGA AGGGGTCGGC TACATCTGGA TGGGCGCTAT CATGGGCACA
CTGGTGGCGG TGGGATATCT GATCTCAATG GCCGGTGTCC GTGAAGACAT CTCAAAAATC
AAAGATGATC GGTTCGGGTT GATCGAATCA CTCCGTATTG CGCTTTCCAG TCGTCCTTTC
CGCTGGTTCA TCGGCGCCAA TATCGCCAAA GAATATATCT GGCTGGTGCT GGCGGCGATG
CTCCCATTCT GGCGCAAATA TGCGCTTGGC ATTCAGGGAC AAACGGAAGT CTTTGGTATG
CGCCTGAGCG GCGGCGACGC CGAGGCGATC CTGCTTGGCG TGCCCATCCT GCTAACGATC
CCGATGCTCC TGATCTGGCG CCCAATGGTC GCGCGGATTG GACCGCGCCG GTCGTGGATT
ATCACCAGTT TCTGCTTCAT TCCCGGATTT CTTGCGATGA TCCTGGCAAA TGACTTTTAT
ACTGGCTTGA TTGGCACGCT CCTGGTGGTT CCCGGACTGG CAGGGTCGAT GATTATGCCG
TTCCCGCTCA TCTCTGAAGT TATCGACGAC GACGCGGCGC GCCACGGCTA CCGGCGCGAA
GGGATCTTCT TTGGCATCAA TGGCGGCATC ACCAAACTGG CGTTTTCGGC GCAGGGGGTG
CTCTTCGCCG CCGTTTTGTC GTTATCGGGG TATGTGGCAG GGAGCGACGC GCAACCGGAA
AGCGCCGCGT GGGGCGTTCG CTTCCTGATC GGTGGCACGC CGATGATTGC GGCGCTGCTC
ATCGCTTTCT TTATGTGGAA GTACCCGCTG GAACGCGCCG TCAGGCGCGA CCTCGCGCTG
GAAAGGACGT CCTCGTGA
|
|---|
| Protein sequence | MGRLLRYIAY SMGNFANTIA YQVFGNRIQF YYVDVLGLNA AAAGVIWTIY GLWNAINDPL
MGQLSDRTRT PMGRRVPYVL FGAVPLGLSF FFLWTPPGQS PWLLAAYFLI ILFIFDTLYS
LTIIAYNALF PEVAPHLKAR IDLSAVREVL ATIALLLSFI LAPILAEGVG YIWMGAIMGT
LVAVGYLISM AGVREDISKI KDDRFGLIES LRIALSSRPF RWFIGANIAK EYIWLVLAAM
LPFWRKYALG IQGQTEVFGM RLSGGDAEAI LLGVPILLTI PMLLIWRPMV ARIGPRRSWI
ITSFCFIPGF LAMILANDFY TGLIGTLLVV PGLAGSMIMP FPLISEVIDD DAARHGYRRE
GIFFGINGGI TKLAFSAQGV LFAAVLSLSG YVAGSDAQPE SAAWGVRFLI GGTPMIAALL
IAFFMWKYPL ERAVRRDLAL ERTSS
|
|---|
| |