| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2190 |
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| Symbol | |
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| ID | 5539671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2814450 |
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| End bp | 2815874 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894323 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001432291 |
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| Protein GI | 156742162 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATTT CGCCTGTCGG CAGAACGCCG GACGAGATCA TGACCCTCCT CCACGGATTC
AAGGCGCAGG ATATGGACTG GCGCTCCGGT CGGGTTTTTG CGTATATCTA TCAGCCCGCT
GAGATCGCTG CGACGCTGGT CAAAGAGGCA TACTCATTGT ACCTCAGCGA GAACTGCCTG
GACCCGACGA CCTTTCCGAG CGTGGCACAA CTGGAGAATG ACGTTGTGCG CATGATCGCC
GGGTTGTTGC AGGGCGACGA GTGCGTTGTC GGCAATATGA CCAGTGGCGG CACGGAGAGC
ATTCTCCTGG CAGTGAAAAC CGCGCGCGAT TGGGCGCGCG CACACCGACC ACACGTGACA
CAGCCGGAGA TGATTCTGGC GCGCACGGCG CACGCTGCGT TTCACAAGGC AGGTCACTAT
CTCGGCGTTA AACCGGTCGT CGTCGAGTTC GATCCGGTGA CGTTCGAGGC GGATGTGACG
GCAATGCGCG CAGCCATCAC CGACAACACC ATTCTGCTGG TTGCATCGGC GCCATGCTAC
TCGCAAGGAG TGATCGACCC TGTGCCCGCA ATCGCAACAC TGGCGCAGGA GTACGGAGCG
CTCTGCCACG TCGATGCATG CGTCGGCGGG ATGTATCTCC CGTTCCTGCG CACCCTCGGG
CGAACGATCC CGCCATTCGA CTTCAGTGTT CCCGGCGTTA CGTCGATCTC AGTAGACATG
CACAAGTACG GCTACGCTGC AAAGGGGGCA TCGGTCGTGC TCTACCGCGA CCGTAGCCTG
CGGCGGCATC AGATCTTTGC CTCGACCGAA ACGACCGCGT ATACCATTAT CAATCCCACG
GCGCTCAGTT CGCGTTCAGC AGGACCAATC GCAGGTGCGT GGGCGATCCT GAACTACCTG
GGAGAAGCAG GCTACCGCGA TCTGGTTGCG ACCGTGCAGG CGGCAACGGA GCGGTTAATG
GCGGGGGTTG ATGCGATTGA TGGTCTGTAT GTGTTGGGTC GTCCGGCAAT GAGTATGTTT
TCCTTCGCAT CGCAAGCGAT CAATGTCTTT CAGCTGGCTG ATGCTCTGCG TCGCCGTGGT
TGGTACCTTC AGCCGCAGTT TTCGACGCCG CGCTCACCGC GCAATCTGCA CGTTTCTATC
ACGTATGGCG TCGCGCATAA CGTCGATGCG TTGATCGCCG ATATTGCCGC CTGCGTTGAG
GAAGTTCGGC ATATGCCGCC GATTGACCTG GCGCTGGTGC GTTCGGTGGT CGAGGCGCTC
ACGCAAGACC CTTCGCCAGC CGTAGTCGAA GGACTGATGG CAGCGGTTGG GTTGCAACCG
GGTGCGTTGC CGCAGGAGAT GGCGCTGATC AACGAGGTGC TCGACACACT GCCGGATGCA
GTGGCGAATG AGGTGTTGAT CGACTTCTTT AACAACCTGT ATTGA
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| Protein sequence | MTISPVGRTP DEIMTLLHGF KAQDMDWRSG RVFAYIYQPA EIAATLVKEA YSLYLSENCL
DPTTFPSVAQ LENDVVRMIA GLLQGDECVV GNMTSGGTES ILLAVKTARD WARAHRPHVT
QPEMILARTA HAAFHKAGHY LGVKPVVVEF DPVTFEADVT AMRAAITDNT ILLVASAPCY
SQGVIDPVPA IATLAQEYGA LCHVDACVGG MYLPFLRTLG RTIPPFDFSV PGVTSISVDM
HKYGYAAKGA SVVLYRDRSL RRHQIFASTE TTAYTIINPT ALSSRSAGPI AGAWAILNYL
GEAGYRDLVA TVQAATERLM AGVDAIDGLY VLGRPAMSMF SFASQAINVF QLADALRRRG
WYLQPQFSTP RSPRNLHVSI TYGVAHNVDA LIADIAACVE EVRHMPPIDL ALVRSVVEAL
TQDPSPAVVE GLMAAVGLQP GALPQEMALI NEVLDTLPDA VANEVLIDFF NNLY
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