| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2187 |
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| Symbol | |
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| ID | 5539668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2809167 |
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| End bp | 2810570 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894320 |
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| Product | peptidase M20 |
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| Protein accession | YP_001432288 |
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| Protein GI | 156742159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.119199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTT CAACAGCATC GGAGACGCTG GCTACCGTCA TTGCACATCT GCGTGATCGC
CAGCATGCGC ATCTGACGGC ATTGGGCGAG TTTCTCTCCA TTCCCAGTGT CAGCATGGAC
CCGGCGCACG CGGCAGATAT GGCGACCGCT GCGCAGTGGA TGGTTGATTG CCTGCAACGT
ATTGGTATGA CGCGCACCGA AATCGTGGCG ACCGCCGGGC ATCCAATCGT CTTCAGCGAG
TGGCTGGATG CTGGCTCTGC TATGCCGACG CTTCTCATCT ACGGGCATTA CGACGTGCAG
CCCGCCGATC CAATCGACGC CTGGCATACG CCACCATTTG CGCCTTCCAT CCGGGATGGC
AATCTCTACG CGCGCGGCGC TTCCGACGAC AAGGGGCAGG TGATGGCGGT CGTCGCGGCG
CTTGACGCCT GGTTGCACAC CTTCGGACGG TTACCGATCA ACGTCAAACT GCTCGTCGAA
GGGGAAGAAG AAACATCCAG CGTCGGACTA CGACGTTTTG TCCGCACTGA AACGGAACGT
CTGCACTGCA ACGCCGTACT GATGGTCGAT TCGTCGATGT TGACACCGCA GCACCCGCTC
ATTCTCTACG GAACGCGGGG GAATTGTTAT CTGGAGATCA CAGTACGCGG ACCGGCGAGC
GACCTGCACT CAGGAACCTT TGGCGGTGCA GTAGAGAACC CGTTCAACGT CCTCGTCCGA
CTGCTGGCAT CGCTCCAGGA TGGCGACATG CGCCGCGTGC AGGTTCCCGG ATTCTACGAC
AGGGTGCGGA CCGTAGACGA CGCCGAGCGA CGTCTGCTGG CGTCGCTGCC GCTGAATGAC
GCTGTGCTCC AGGCGATGAC CGGCGCGCCC GCGCTCGCCG GCGAAGCAGG CTATTCCGCC
ATCGAGCGCG CCAGCATCCG ACCAACGCTG GATATTCACG GCATCAGCGG AGGATTTACG
GGACCGGGAA AGAAAACCGT CATTCCGGCG CAGGCGACGG CAAAACTCTC GATGCGGCTC
GTGCCCAACC AGGACCCGGA AGATATTGCG CGGCAGGTCA TTGACTTTTT GCGCCGTCAG
GCGCCACCGA CCGTATCGCT CGATGTGCAC ATCCTGAGTG CGTCGCGTCC GGTGCTCATC
GATTATCGTG TGCCAGAGGT TCAGGCGGCG TCACAGGCAT TCGAAAAAGC ATTCGGCGCA
CTGGCTGGAT TTATGATCGG CGGCGGTACA TTGCCGATCG CAGCTGATTT TCAAGAAGCC
CTGGGGGCGC CGCTGGTGAT CACCGGTTTC GGTCTGCCCG ACGATAACAT GCACGCGCCA
AACGAAAAGT TGAACCTCTC CTGTTTCTTC CGGGGGAGCG AGATGATCGC CCATTATCTG
GCAGCGCTTG CCTCATGCCC CTGA
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| Protein sequence | MSGSTASETL ATVIAHLRDR QHAHLTALGE FLSIPSVSMD PAHAADMATA AQWMVDCLQR
IGMTRTEIVA TAGHPIVFSE WLDAGSAMPT LLIYGHYDVQ PADPIDAWHT PPFAPSIRDG
NLYARGASDD KGQVMAVVAA LDAWLHTFGR LPINVKLLVE GEEETSSVGL RRFVRTETER
LHCNAVLMVD SSMLTPQHPL ILYGTRGNCY LEITVRGPAS DLHSGTFGGA VENPFNVLVR
LLASLQDGDM RRVQVPGFYD RVRTVDDAER RLLASLPLND AVLQAMTGAP ALAGEAGYSA
IERASIRPTL DIHGISGGFT GPGKKTVIPA QATAKLSMRL VPNQDPEDIA RQVIDFLRRQ
APPTVSLDVH ILSASRPVLI DYRVPEVQAA SQAFEKAFGA LAGFMIGGGT LPIAADFQEA
LGAPLVITGF GLPDDNMHAP NEKLNLSCFF RGSEMIAHYL AALASCP
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