| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2182 |
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| Symbol | |
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| ID | 5539663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2804191 |
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| End bp | 2804928 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894316 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432284 |
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| Protein GI | 156742155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00857357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATCGC CCATTCTCCG TATCGAAGAC GTGCATAAGT CATACGGCGC CCTTCAGGTG
CTCAAAGGCG TATCGCTGAC TGTGCAACCA CGCGAGGTCG TGGTGCTGGT GGGACCGAGC
GGGTCCGGCA AGAGTACGCT GCTGCGCTGC ATCAACCTGC TCAACCCGCC GACGAAAGGG
CGCATCTGGC TGGAAGATCA GGAGATCACC GCACCCGGCG TCAATCAGGA CCGGGTGCGC
CAGCGTATTG GAATGGTGTT CCAGGAGTTC AATCTCTTCA CCCACCTGAC GGCGCTCGGC
AACGTGATGC TTGGTCTGGT TAAGGTGCGC AAGATGCGCA AAAACGAAGC GCGCGACCTG
GCGATGTTCG AGTTGGAGCG CGTGGGACTC GCCGACCGCG CCCATTATTA CCCGGCGCAG
TTGTCCGGCG GACAGAAGCA GCGGGTGGCG ATTGCCCGCG CCTTGGGGAT GGATCCGCAC
ATCATGCTTT TCGATGAACC CACGTCGGCG CTTGACCCGG AATTGACCGG CGAAGTGCTC
GCCGTGATGC AGAAACTTGC TGGCGAAGGC ATGACCATGA TCGTCGTCTC GCACGAGATG
GGATTCGCCC GGCAGGTCGC CAACCGAGTC GTGTTTATGG AAGGCGGCGT GGTCGTGGAA
GAAGGAACAC CGCAGCAGAT GTTCGAACAA CCGGTCCACG AACGGACACG CGTGTTTTTG
CGGAATATTA CACAGTAG
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| Protein sequence | MTSPILRIED VHKSYGALQV LKGVSLTVQP REVVVLVGPS GSGKSTLLRC INLLNPPTKG
RIWLEDQEIT APGVNQDRVR QRIGMVFQEF NLFTHLTALG NVMLGLVKVR KMRKNEARDL
AMFELERVGL ADRAHYYPAQ LSGGQKQRVA IARALGMDPH IMLFDEPTSA LDPELTGEVL
AVMQKLAGEG MTMIVVSHEM GFARQVANRV VFMEGGVVVE EGTPQQMFEQ PVHERTRVFL
RNITQ
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