| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2180 |
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| Symbol | |
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| ID | 5539661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2801850 |
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| End bp | 2803163 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894314 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432282 |
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| Protein GI | 156742153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0133963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAA AACCCCGTCT CACCCGCCGT CAGTTCCTGA TCGGAGGGGG AATAGCCGTC
TCAGGGCTCC TGGTCGGACA TATGCAGCGA ACGATTGGGT ACGCAACACA CCTCGCAAAC
GATGCGCCGG TTGTTGCGCG AGTGTATTGC CCGTTGATCG TGGTCGATGC GCGAGCCACC
ACAACAGCAA CCGCGTCTTC CACGCTCACT CCCTCGCCGA CGTCAACTTC CTCGCCGACG
TCAACTTCCT TGCCGACCGC CACTCCCTCC CCGACCGCGA CAGCAGTTCC CCTGCCGCGC
GGACACGTGG TTCACACCTA CCACCCGCGC GCGACTTTCT GGAACTTTTC GAGCGGTTGG
TACGGCGACA GCGTCGATGC CCAGATCGTC GCCGATATGG TCGATGAAGG CATCACGCGA
TTGACCCGCA CCTCGACGCG CGCCGACGCA TGGTCCGTTC TCCTTCCGAA CTATCAGCCG
GGGCAAATGA TCGGTATCAA GGTCAGCCTG AACAATGCAG CGCGCGAAGA CGACGATAAT
GAGATCGACG CCTTGATGGA GCCTATCAAT GCCGTTATTC GCGGGCTGCT GGCAATCGGC
GTTCTTGAGC AGCATATCTG GATATTCGAT GTCACCCACG GCGATCACCC GGGCATTATT
CCGCTGCGAT TCAAGCGCCG CTGCGCGTAT TCGCAGGTCA ATTTCGCCTC CTATCAGGAC
GAACATCCCG AATTAGGCTT CAGCACAACC GAGACGGTTC GTTTCAACAC TCCTTCGGGC
GTTGCTGCTC TCCCAGACCT GCCCTTTTGC AATGCGTTGG TCCATCTGCA TTACCTGATT
AACATGCCGA TCATGAAGCG TCATGTCGGC GCCGGCATCA GCCTGGGATT CAAGAACCAC
TTTGGATCGA TTGATCGGTG CAACCTGCTG CACCGGTACA CCGACATCGG CGCCGATTAT
TTCTCCGACC GGTACAGCCC GCTAGTCGAT ATCAACAATC ATCCGCAGAT CCGCCAGAAG
ACTATTCTCA CCATCGGCGA CGGGCTGTTC GGCAACCCCG TGAACAATAT CAGCGCGCCA
CGCCGCTGGC GCACCTTCGG CAATGCAGCG CCCAACAGCC TGTTCTTCTC GCGCGACCCG
GTCGCCATTG ATTGTATCCT GGCGGACTAT CTGCGCGCTG AAAGCGGCGA AATTGCAGGC
GCTGACCATT ACCTGAGGCT GGCCGGCGCC GCCGGGCTGG GAGTGTACGA ACGCGGCGAT
CCGTGGGGAG GCGGATACCA TCAGATCGTA TACGAGCGCA TCAACCTTTC TTGA
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| Protein sequence | MDRKPRLTRR QFLIGGGIAV SGLLVGHMQR TIGYATHLAN DAPVVARVYC PLIVVDARAT
TTATASSTLT PSPTSTSSPT STSLPTATPS PTATAVPLPR GHVVHTYHPR ATFWNFSSGW
YGDSVDAQIV ADMVDEGITR LTRTSTRADA WSVLLPNYQP GQMIGIKVSL NNAAREDDDN
EIDALMEPIN AVIRGLLAIG VLEQHIWIFD VTHGDHPGII PLRFKRRCAY SQVNFASYQD
EHPELGFSTT ETVRFNTPSG VAALPDLPFC NALVHLHYLI NMPIMKRHVG AGISLGFKNH
FGSIDRCNLL HRYTDIGADY FSDRYSPLVD INNHPQIRQK TILTIGDGLF GNPVNNISAP
RRWRTFGNAA PNSLFFSRDP VAIDCILADY LRAESGEIAG ADHYLRLAGA AGLGVYERGD
PWGGGYHQIV YERINLS
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