| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2179 |
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| Symbol | |
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| ID | 5539660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2801216 |
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| End bp | 2801776 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894313 |
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| Product | PadR-like family transcriptional regulator |
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| Protein accession | YP_001432281 |
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| Protein GI | 156742152 |
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| COG category | [K] Transcription |
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| COG ID | [COG1695] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00487663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCG TTAAGCGTCC CCTGACAATT GAACTGTCGC TCCTCGGGTT GGTGCGGCAA
CAACCGATGC ATCCCTATGA GATTCATCAG CGCCTGACCA CCACAGCGCT GAGCGATGTC
TGGCGCATCA AGCAGGCGCA TCTCTATGCC CTGCTGCATC GTCTTGAAGA CGAAGGACTC
CTCGTCGGAA CCACCGAGAA CCAGATCAAT CGCCCGCCGC GCCGGATGCT GCGTCTCACC
GAGCAGGGAC GCGCAGCGTT CGACGAATGG ATGCGCGCAC CGGTTACACA CGGGCGCGAT
TTCCGGCTCG AGTTCCTGGC AAAACTCTAC TTTGCCCATC AGGAAGGCGC CGCCGCCACG
CAGTCACTGA TAGACCAACA GCGGAACGCC TGTCAGCGCC TGCTCGACGA CCTCGATCAC
CGGGAGGCAA CGCTCCCCAC CGATCACGTG TATCGCCATC TCGTCGTTCA GTTTCGACGC
GGGCAGATCC AGGCGATCCT GGCATGGCTG GATGCGTGTC GCATTGCGTT GCATGCGGGA
CGGTTGAACG TTGCACGTTG A
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| Protein sequence | MSTVKRPLTI ELSLLGLVRQ QPMHPYEIHQ RLTTTALSDV WRIKQAHLYA LLHRLEDEGL
LVGTTENQIN RPPRRMLRLT EQGRAAFDEW MRAPVTHGRD FRLEFLAKLY FAHQEGAAAT
QSLIDQQRNA CQRLLDDLDH REATLPTDHV YRHLVVQFRR GQIQAILAWL DACRIALHAG
RLNVAR
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