| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2166 |
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| Symbol | |
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| ID | 5539646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2782816 |
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| End bp | 2783976 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894299 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001432268 |
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| Protein GI | 156742139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.978798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000549931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCCTC TGATCTTTGT CGAACCAGAC ACGCAGCAGA AACTCTCGAT CCTGAGCGCA
GAAGCCGGAT TCGAAGCCAC AACGGTTCCA GCCGTCGAAC GGGTACAGCA GGGGATGCGC
CATCCCGCCG GTTTTCTCTA TACTGCCAGG AAAGAAGGCG GGGGGACAGC GCGCCTCTTC
AAAGTGCTCC AGACGAACGC CTGCCGCTAC GCCTGCCGCT ACTGCTTCAC CTCGTGCGCA
GTGCGACGTT CCCGCACGAC GTTTAAGCCC GACGAACTGG CAACAACCTT CATTGCGCTG
CATCGTTCCC GGCAGGTCGA TGGGCTGTTC CTCTCCTCCG GGATTGTCCC CGACGCCAAT
GCAACGATGG AGAAGATGCT GGCGACAGTC GAACGATTGC GACTGAAAGA AGGATACACG
GGCTATATCC ACCTGAAGTT GATCCCCGGC GCGGCATTCG AGTATATCGA GCGCGCCGTT
GAACTGGCAG ACCGCGTTTC GTTGAACCTG GAAGCGCCTA ATGCCGAACG CCTGGCGATG
CTTGCGCCGG AGAAAGAGTT TGCCGGCAGC ATGTGGGGGC GCATGGCATG GGCTGCCGGG
TTGATCCGCC GGGCGCGCGC CGCCGGGCGC CCCGCTGCCC GCAGCCTTAC GACGCAGTTC
GTCGTTGGTC CGGCGGGCGA AAGCGACCGT GAGTTGCTCG AAACGGCGGC GCGCACCCAC
CGCGACCTCG ACCTGCGCCG CGCATTCTTC AGCGCCTTTC ACCCCATCGA ACGCACACCG
TTCGCCGATA TGCCCGCCGA AGACCCACTG CGCGAACTGC GGCTCTATCA GGCGGATTTT
ATGCTGCGTG ATTATGGTTT CACCGTTGAC GAATTGCCAT TCGATGAGCG TGGCCTGCTG
CCACGCACCA TCACTCCGAA ACAGGCCTGG GCGGAACGCC ATCTTGTTGA GCCGATCGAC
GTGAATGTTG CGCCGCGACG CCTGCTGCTT CGCATCCCCG GCATCGGTCC ACGATCCGCC
GACCGGATCA TTGCTATGCG ACGCGAGATG CACCTGCGTG ATATGGCGCA TCTCGCGCGG
CTTGGCGTGG TGGTCAATTG GGCGGCGCCC TATGTGCTGC TCGATGGAAG ACGCCCGCCG
GAACAGGGGC GTTTGTGGTA A
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| Protein sequence | MSPLIFVEPD TQQKLSILSA EAGFEATTVP AVERVQQGMR HPAGFLYTAR KEGGGTARLF
KVLQTNACRY ACRYCFTSCA VRRSRTTFKP DELATTFIAL HRSRQVDGLF LSSGIVPDAN
ATMEKMLATV ERLRLKEGYT GYIHLKLIPG AAFEYIERAV ELADRVSLNL EAPNAERLAM
LAPEKEFAGS MWGRMAWAAG LIRRARAAGR PAARSLTTQF VVGPAGESDR ELLETAARTH
RDLDLRRAFF SAFHPIERTP FADMPAEDPL RELRLYQADF MLRDYGFTVD ELPFDERGLL
PRTITPKQAW AERHLVEPID VNVAPRRLLL RIPGIGPRSA DRIIAMRREM HLRDMAHLAR
LGVVVNWAAP YVLLDGRRPP EQGRLW
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