| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2162 |
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| Symbol | |
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| ID | 5539642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2777336 |
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| End bp | 2778613 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894295 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001432264 |
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| Protein GI | 156742135 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.314741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000328198 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACCGG GCATTAACCT TCAGCAGACC CTGAGCCGGA CAACGCTGGC GGTCGGTGAC
GAACCGCAAT TGATCTATGT GCTCCTGGAA GCGCACGCTG AAGGGTTGGC ACAGCAGTTG
CCCAAATTGC CGCTGAATCT GTGCCTGGTG CTCGATCGCA GTTCTTCGAT GCGCGGGGAG
CGCCTGATGC AGGTCAAGGA CGCCGCAGCA CGCATCGTCG ATCAATTGGG GCAGGACGAT
TATTTTTCGC TGGTGGTGTT CAACGACCGG GCTGATGTGG TTATTCCGGC GCAGCGCGCG
ATCAAGAAGG CGGACCTGAA AGCGGCGATT GCGCAGATTG AGGCGGCCGG CGGCACGGAA
ATGGCGCAGG GGATGGCGCT GGCGCTCCAG GAGGTGCAAC GACCGTTTCT GACACGCGGC
ATTAGCCGGA TCATTCTGTT GACCGATGGC CGCACCTACG GCGACGAGAG CCGGTGTGTC
GAGATCGCTC GCCGCGGGCA GTCGCGCGGC ATTGGGTTGA CGGCGCTCGG AATTGGAACG
GAATGGAACG AGGACCTGCT CGAAACGATG ACCGCCAGCG AAAACAGTCG TGCTCAGTAC
ATCGCCACTG CCCAGGATGT CGTCAAGGTC TTCGCCGATG AGGTGAAGCG CCTCCATGCC
ATCTTCGCCC AACAGGTGCA ACTGTCGGTC GAGACACGCC CCGGCGCGTT GTTGCGGTCG
CTCGATCAGG TGCGCCCTTT CATTGCGCCG ATTACCATTA TCGAAGAAGC AGAGCGCCGC
TGGGTGGCCA ATCTGGGAGA CTGGCCCGAT ACCGGCGTGC AGGGATTTCT GCTCGAAGTC
GTTGTGCCTC CCTTACCGGT TGGTGATCAC GCGGTGCTGA AACTGACGTT GCGCTATCAT
CTGCCTGGGG CAAACCTGCG CGATCAGGCG CGTGAACTCA TGGTTCGCGT TAGCCTGCGC
CCGGCGGAAG AGGTCACCCA TCGCGTCGAT GCAACCCTCA AACACTGGCT GGAGCGCCTG
GTGGCGTATC GCCTGCAAGC AAACGCCTGG AAGTGCGCGG CGGAAGGACG ACTCGAGGAA
GCGAGCGAGC GTCTGCAAAT GGCAGGAACG CGCATGCTCA ACGCTGGCGA CGCGGCGCTG
GCGCATACGT TGCAACAGGA AGCGACGCGC ATTCTGCGCA ACGGAACGGT GAGCGAAGAG
GGACGCAAGC GCATCCGCTT TGGCACTCGC GGTCTGATCG GTCCGGTTGC CGACGATGAA
CGCGAGACTA CGACGTGA
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| Protein sequence | MTPGINLQQT LSRTTLAVGD EPQLIYVLLE AHAEGLAQQL PKLPLNLCLV LDRSSSMRGE
RLMQVKDAAA RIVDQLGQDD YFSLVVFNDR ADVVIPAQRA IKKADLKAAI AQIEAAGGTE
MAQGMALALQ EVQRPFLTRG ISRIILLTDG RTYGDESRCV EIARRGQSRG IGLTALGIGT
EWNEDLLETM TASENSRAQY IATAQDVVKV FADEVKRLHA IFAQQVQLSV ETRPGALLRS
LDQVRPFIAP ITIIEEAERR WVANLGDWPD TGVQGFLLEV VVPPLPVGDH AVLKLTLRYH
LPGANLRDQA RELMVRVSLR PAEEVTHRVD ATLKHWLERL VAYRLQANAW KCAAEGRLEE
ASERLQMAGT RMLNAGDAAL AHTLQQEATR ILRNGTVSEE GRKRIRFGTR GLIGPVADDE
RETTT
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