| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2158 |
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| Symbol | |
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| ID | 5539638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2771944 |
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| End bp | 2773869 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894291 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432260 |
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| Protein GI | 156742131 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000475979 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCAA AACATCTGTC TCGCCGCGCG GCTCTGTCTG CCGCTGCGAC ATTCGCCGCG
CTTGCGTCGA TCCCTTCCGC GTTTGCGCAG GAAGGCGTAG CGCTTGTTGC CCGTCGCGCG
GTGGTTGCGC CGCTCCAACC GGTCGAGGTT GACGTGCGCA TTCCCGGATA CACCGGTCCT
GCTGCCGTTA TCCTGTTCGA CAGCCGCAAA CGGTTCGCCG GCGTTGCCGA AGGACACGTC
GAGAACGGCA TTGGAACCCT GATCGCCGTG CCGCGCGGCG CGCCCGGTGC GCAGTGGGTG
GCGTTGTTCG CCTCTGGTCG ATTCGTCGCC GCCAATCCGG CGCTGTTCTC ACTCGATGCG
CGCACCGAAA TCTGGACCGG GCAGGAACGC TTCGACCGGT TTGTGCCGAA TGCGGCTGCC
ATATTTGCTG CTGCCACGCT GTCGTACACC TTCAATGGCG CATTCTTTCA CGGTTACCGT
TCGCCCGACA GCCCGCTGAT CTGGTTGCGC GACCACGTGT ACGCACAACG CGGCGCGCGC
TACTTCGACG CCGATCTCAA AACCGCCTTT GACGACTTTC GCCGCTACCA GCAACCGGAT
GGCAGTTTCC CCGATTTCCT GCCGCGCCCT CCATGGACTG ATCGCGCGCT CCGGGTGCCG
GTCGAAGCCG ACGTTGAGTA CCTCTACGTC CAGGGAGTGT ACGAAGCCTG GCAGGCGACT
GGCGACGATG CCTGGATGCG TAGCCACCTG GAACCGATGC GGCGCGCCGT GACGTACTCG
TTGCAGCACC CGCTGCGCTG GGACGCCGAA CGTGGTCTGA TCAAGCGCCC TTTCACCATT
GACACCTGGG ATTTCGAGTA CGGTTCGACG ACGACCGACC CGGAAACGGG CAAGCCTGCG
CCGCGCCACT GGATCGACGA CAAGACGATC TGGGGCGTTT TTCACGGCGA CAACACCGGC
ATGGCACAGG CGCTGACGAT GCTGGCGCGG ATGGAAGAGC GCGTCGGCGA TGCAACCCTG
GCGCGTGTCT GGCGTGATGT TGCCGCCGGT CTGATACGCA ACCTGAATGC GCTCAGTTGG
AACGGGCGCT TCTTCCGCCA TCATGTCCCC TTTCAGTCCT TCGACATCCC CGGCGTTGAT
CGGGAGCGGC AGTTGAGCCT CTCGAACGCC TATGCGCTCA ACCGTGGCGT GCTCACCGTT
CAGCAGGGGC AGGCGATCAT CGACGAATAT ATCGAACGCT CGAAGACTAT GCGCGCATTC
GCGGAATGGT TTAGCATCGA TCCGCCCTTT CCACCGGGAA GTTTCGGGCT TGCGGGGCGC
AGCGGCGAAC TCCCCGGCGC GTATGTCAAC GGCGGCATCA TGCCGATCAC CGGCGGCGAA
CTGGCGCGCG GCGCATTTCG CTACGGCAAC GAAACCTATG GCTTCGCCAT TCTCGAACAC
TACTGGCTGC GCATGCTCAG TCGCGGGCGC ACCTTTCTCT GGTACCATCC CGACGGCGCA
GAAGGGGTCG GCTCCGATGA CACCATTCCG ACCGATGCGT GGGGGACGGC TGCGATGTTT
ACTGCGCTGA TCGAGGGCGC TGCCGGCATC GAGGATCAGG GCATCGCCAT GCGCGATGTA
ATCGTCAGCC CTCGCTGGGG CGCCGCTGGT CTGACCTCGG CGTATGTCTC GGCGCGCTAC
CCGGCGAGCG ACGGGTATCT GGCGTATGCC TGGCGTCAGC ATCCGCGCCG TATCGACCTC
GACCTGAGCG GGGTCTTTGA TCGCGCGCGA GTGAGGGTGC TGCTGCCGCA GGACACGCCG
GGATCGGTCG AAGCGCTGGT CAACGGTGTG CCCGTGCCGC ATACCATCGA AACCCTGCGC
GCCAGCCGGT ATGTCATCAT CGACGTAGCG GATATGGCAG TTGTTCAGGT ACAGGTGCGC
TGGTAG
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| Protein sequence | MPSKHLSRRA ALSAAATFAA LASIPSAFAQ EGVALVARRA VVAPLQPVEV DVRIPGYTGP
AAVILFDSRK RFAGVAEGHV ENGIGTLIAV PRGAPGAQWV ALFASGRFVA ANPALFSLDA
RTEIWTGQER FDRFVPNAAA IFAAATLSYT FNGAFFHGYR SPDSPLIWLR DHVYAQRGAR
YFDADLKTAF DDFRRYQQPD GSFPDFLPRP PWTDRALRVP VEADVEYLYV QGVYEAWQAT
GDDAWMRSHL EPMRRAVTYS LQHPLRWDAE RGLIKRPFTI DTWDFEYGST TTDPETGKPA
PRHWIDDKTI WGVFHGDNTG MAQALTMLAR MEERVGDATL ARVWRDVAAG LIRNLNALSW
NGRFFRHHVP FQSFDIPGVD RERQLSLSNA YALNRGVLTV QQGQAIIDEY IERSKTMRAF
AEWFSIDPPF PPGSFGLAGR SGELPGAYVN GGIMPITGGE LARGAFRYGN ETYGFAILEH
YWLRMLSRGR TFLWYHPDGA EGVGSDDTIP TDAWGTAAMF TALIEGAAGI EDQGIAMRDV
IVSPRWGAAG LTSAYVSARY PASDGYLAYA WRQHPRRIDL DLSGVFDRAR VRVLLPQDTP
GSVEALVNGV PVPHTIETLR ASRYVIIDVA DMAVVQVQVR W
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