| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2153 |
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| Symbol | trpD |
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| ID | 5539633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2764760 |
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| End bp | 2765782 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640894286 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001432255 |
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| Protein GI | 156742126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.286108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00266226 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAATCC GTGATCAGAT TATCCAGATC GTTCGGGGTC ATGATCTCAC CGAAGAGCAG
GCTGCCGAAG CGATGGAAGA AATTATGACC GGCGTGGCGA CCCCGGCGCA GGTCGCGGCG
CTGCTCACAG CGCTCCACCT GAAGGGCGAA ACCGACGCCG AGATCGCCGG CATGGCGCGG
GTTATGCGCG CCAAAGCCAT CCCCGTCCAC TTCGACGGTC CGCTGCTCGA CACATGCGGC
ACCGGCGGCG ACAGCGCCGG CACGTTCAAC ATTTCGACGA CCGCCGCGTT CATCGCGGCA
GGCGCCGGCG CAACGGTCGC CAAGCACGGC AACCGTGCCA TGTCGAGTGT CTGCGGCTCT
GCCGACGTGC TCGAAGGGCT GGGGGTCACC ATCGATCTCG ACGCCGCTGG CGTGGCGCGC
TGTCTCGAAC AGGCGGGCAT TGGGTTCATG TTCGCACAGA AGTTCCATCC GGCGATGCGC
TTTGTCGGAC CGGTGCGCCG TGAGATCGGC ATCCGCACCA TCTTCAACGC CCTCGGTCCG
TTGAGCAACC CGGCGCAGGC ACGCCACCAG ACGCTTGGTG TCGCCGATCC GGCGCTGGCG
GAGAAGATGG CGCGCGCGCT TTACCTTCTC GGCGCGCAGC ATGCTCTGGT CGTTCATGGG
CACGGCGGGC TGGATGAACT GACCCTGAGC GGACCGAACC TCGTCATCGA AGTGCGTGCC
GGTCACAAGC CGCGACGGTA TGAGGTCAGC GCCGGCGACC TGGGGCTGAC GCCTGCCCCG
CGCGAGGCGC TGCTCGGCGG CGATGTATCG ACGAACGTGG CGATTGTTCG CGCCATTCTC
AGCGGAGAAG AACGGGGAGC ACGGCGCGAC GTGGCGTTGC TGAACGCCGC CGCCGCTCTT
GTTGCCGCCG ACTACGCCGC CGACCTGCGC GAGGGGTTGC AGCAGGCGCG GCAGAGCCTT
GAGAGTGGCG CCGCCCTGGC GCGCCTGGAG CGGCTTATCA CGGTCAGTAG CATCAACCGT
TGA
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| Protein sequence | MPIRDQIIQI VRGHDLTEEQ AAEAMEEIMT GVATPAQVAA LLTALHLKGE TDAEIAGMAR
VMRAKAIPVH FDGPLLDTCG TGGDSAGTFN ISTTAAFIAA GAGATVAKHG NRAMSSVCGS
ADVLEGLGVT IDLDAAGVAR CLEQAGIGFM FAQKFHPAMR FVGPVRREIG IRTIFNALGP
LSNPAQARHQ TLGVADPALA EKMARALYLL GAQHALVVHG HGGLDELTLS GPNLVIEVRA
GHKPRRYEVS AGDLGLTPAP REALLGGDVS TNVAIVRAIL SGEERGARRD VALLNAAAAL
VAADYAADLR EGLQQARQSL ESGAALARLE RLITVSSINR
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