Gene Rcas_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2139 
Symbol 
ID5539619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2749989 
End bp2750768 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID640894273 
Productserine O-acetyltransferase 
Protein accessionYP_001432242 
Protein GI156742113 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0969839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAA AGAACGATAA CCTGCTCTGC GTCATTCGCG ACGATATTCG CGCGATTTTC 
CTCAACGATC CGGCAGCGCG CAACCTGGCA GAGGTGCTGC TCTACCCCGG CTTGCATGCC
ATCCTGTTCC ATCGCCTGGC GCACGCCCTC TGGCGGCGCG GCGTGCCGTT TATTCCGCGC
CTGATCTCGC AGATCAGTCG TTTCCTCACC GGTATCGAGA TCCATCCGGG AGCAGTCATT
GGTCGCGGTT TCTTCATCGA CCACGGCATG GGCGTGGTTA TCGGCGAAAC ATCGGAGATC
GGCGACTGGG TGACTCTCTA TCAGGGTGTG ACCCTCGGCG GCACGGGCAA GCAACGCGGG
AAACGCCATC CAACGGTGCG TAATGGCGCT GTCATCGGTG TTGGCGCGAT TGTGCTCGGC
GCTATCACCA TTGGCGAGGG GGCGCGCGTT GGCGGCGGCG CTGTGGTGGT GAAGGACGTT
CCACCTCACG CCACCGCCGT CGGTGTTCCG GCGCGCATTG TGGCACAACG CGACCCGCAC
ACCGGCGAAA CGCGCCGTGT CGAGCACCTG CCCGATCCCG AAGGGGAAAT GCTGCGCAGC
CTGCGCGCTA AGGTGCTGGA ACTCGAAGAA CGCCTGACCG AACTCGAAAT TGCAACCAAT
CATCACCTCG AACATCACGT CGAGGACGAT GCGCTCGCGT CGCAGTGCTG GTCGGCGCTC
GACACGAATG GGAATGGCAC AATCGATGAG TACGGCTATA TGGCCGGTGA TGGGATATAA
 
Protein sequence
MPRKNDNLLC VIRDDIRAIF LNDPAARNLA EVLLYPGLHA ILFHRLAHAL WRRGVPFIPR 
LISQISRFLT GIEIHPGAVI GRGFFIDHGM GVVIGETSEI GDWVTLYQGV TLGGTGKQRG
KRHPTVRNGA VIGVGAIVLG AITIGEGARV GGGAVVVKDV PPHATAVGVP ARIVAQRDPH
TGETRRVEHL PDPEGEMLRS LRAKVLELEE RLTELEIATN HHLEHHVEDD ALASQCWSAL
DTNGNGTIDE YGYMAGDGI