Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2136 |
Symbol | |
ID | 5539616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2746787 |
End bp | 2747560 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894270 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001432239 |
Protein GI | 156742110 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0581453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCGCC GTTCGCGTGA TACTGTTCAG AGCAACACGT ATCGTTTCTT TGTCGATCCT GCGGCATTCG ACACGGAACG GGTGCGTCTG TTCGATCCCG AACTGGGACA TCAACTGGCA AACGTGTTGC GGTTGGGGCG CGGTGAGCGC GTCGTTTTGC TCGATGGCGA GGGGTGGCAG TACACTGTCA TGTTGGAAAC AGTTGATCGG CGCGGGACGG TGAACGGTGT GATCGAGTCG CGCGAAGTTG CAGGCGGCGA ACCGCGCCTT GCGCTGACCG TCTACCTGCC GCTCATCCGG GCGGAGCGGT TCGAGTGGGC GTTGCAGAAA GGGGTCGAAC TGGGGGTAGC AGCGTTTGTT CCAACCGTAT GTGCGCGCAG CATCGACGCT GCTCCCGACG AGCGCCGTCT TGCGCGCTGG CGGCGGATTA TCCGCGAGGC AGCCGAACAA TCGCGGCGCG GACGGCTTCC GCGCTTGGCG CCTTCCCTGA CGTTCAACGA AGCATGCACA CAGTTTACGC TCCATTCCCC TGCACTGCTT CTATGGGAAG GCGACAACGC CACGCCGCTT GCCGGGGCGC TCCACGCGCT ACGCCGCGAC ACATCACCGG CGGCGCTGGG CATCTTCAGC GGACCAGAGG GCGGATTGAC CAACGATGAA CGCCAATGGG CTGAACGACA TGGTATCATG ATCGTGTCGC TTGGTCCGCG CACGCTGCGC GCTGAAACCG CACCCATTGC GGCTATAGCG ATCATTATGT ATGAGATTGG ATGA
|
Protein sequence | MPRRSRDTVQ SNTYRFFVDP AAFDTERVRL FDPELGHQLA NVLRLGRGER VVLLDGEGWQ YTVMLETVDR RGTVNGVIES REVAGGEPRL ALTVYLPLIR AERFEWALQK GVELGVAAFV PTVCARSIDA APDERRLARW RRIIREAAEQ SRRGRLPRLA PSLTFNEACT QFTLHSPALL LWEGDNATPL AGALHALRRD TSPAALGIFS GPEGGLTNDE RQWAERHGIM IVSLGPRTLR AETAPIAAIA IIMYEIG
|
| |