| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2135 |
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| Symbol | |
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| ID | 5539615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2745006 |
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| End bp | 2746343 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894269 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001432238 |
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| Protein GI | 156742109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0697413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC GTTTTCGGTT CCTTCGTCGT CTTGCCGCTG CAAGTCTGTT CCTGCTAGCG
GGGTTCGCCG GCGGTTGGGT CAGCGCGACC ATTTTTGCCG ACAGCATCTC GCTCACGCGC
CTGGTTCCGG CGATCGGTCC AGGATTGGTT GCCAATCAGG AAACGCCGCC ATCGCTCCGG
CAGCAGTTCC GCGTCTTCTG GGAAGTGTGG AACCTGGTCG AGACCGAGTT CTATCAGCGC
GACAAGATCA ACCACACCCG CATGATCCGC GGCGCCATCA CCGGCATGCT GGCATCGCTC
GACGATCCGT ACACCGTCTA TCAGGAACCG GAGCTGGCAT CACAGACGAA TGAGCACATG
CAGGGGCGAA TGGGAGGCAT CGGCACCTAT CTACGGATCA CCGACGGGCG CGCATTTCTC
TACAAGCCAA TCAAAGGAGC GCCAGCCGAA GCCGCCGGTC TCAAACAGGA CGACGAGATC
GTGGCGATTG ACGGCGAACC GGTCGCGCCG ATGATTGCCG GTCTCGACGT GAACGAAGCG
GCTGTCAAGG TCGCATCGAA AATCCGCGGG CAGGCGGGTA CGCAGGTGCG CCTGACTATC
CGGCGGCAAC CGGACGACCA GGTGTTCGAC ATCACTCTGA CGCGCGCCGA CATCGTGGTG
CCCGGCGTCG AAGCCCAACT GGTCGATGGC GGAATTGCCT ATATTCGCAT TATCGAGTTC
AAAGCCAATA CCGTCCCCGA ATTCGACCAG GCGCTGCGCG AGTTGCTTCC GCAAGCGCCA
AACGGCATCG TCCTCGATAT GCGCAACAAC CCCGGCGGCT TCCTCGACCA GGCGCGTGCC
GTGCTCGGGC GGCTCTACAA TGGGGTCGCG CTCTACGAGC AGAACAGCAA AGGGGAAATC
ACCGAAATCC GCACCGTTGG CGGTGATATT CGCGCCTTCG ATGTCCCCAT CGTCGTGCTG
GTCAATGGCA GTTCCGCCAG CGCCAGCGAG ATCGTCGCTG GCGCATTGCG TGACAGTCGT
CCGAACGTGA CGCTGATCGG CGAGAAAACC TTCGGCAAGG GATCGGTGCA GAACATCTAC
CACCTGAGCG ATGGCAGCAG TGCGCGAATC ACGTTCGCGC ACTGGCTCAC CCCGGCGCGC
ACCGAAATCG ACAAGGTTGG CATTACGCCG CAGTACGTCA TTCCTTATGC CGAAGACCCT
GCCACGCAAA CCCTGTGTGT CGGCGACCGC CAGCCGCCGC CGGGAGCGAC GACCTGCGCC
GACAACCAGT TGTTCTACGC CATCCGGCTG CTGCGCACCG GCGAAGCGCC GCCATCGATG
CCGGCGGCGG CACGGTGA
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| Protein sequence | MAFRFRFLRR LAAASLFLLA GFAGGWVSAT IFADSISLTR LVPAIGPGLV ANQETPPSLR
QQFRVFWEVW NLVETEFYQR DKINHTRMIR GAITGMLASL DDPYTVYQEP ELASQTNEHM
QGRMGGIGTY LRITDGRAFL YKPIKGAPAE AAGLKQDDEI VAIDGEPVAP MIAGLDVNEA
AVKVASKIRG QAGTQVRLTI RRQPDDQVFD ITLTRADIVV PGVEAQLVDG GIAYIRIIEF
KANTVPEFDQ ALRELLPQAP NGIVLDMRNN PGGFLDQARA VLGRLYNGVA LYEQNSKGEI
TEIRTVGGDI RAFDVPIVVL VNGSSASASE IVAGALRDSR PNVTLIGEKT FGKGSVQNIY
HLSDGSSARI TFAHWLTPAR TEIDKVGITP QYVIPYAEDP ATQTLCVGDR QPPPGATTCA
DNQLFYAIRL LRTGEAPPSM PAAAR
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