Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2135 |
Symbol | |
ID | 5539615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2745006 |
End bp | 2746343 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894269 |
Product | carboxyl-terminal protease |
Protein accession | YP_001432238 |
Protein GI | 156742109 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0697413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTCC GTTTTCGGTT CCTTCGTCGT CTTGCCGCTG CAAGTCTGTT CCTGCTAGCG GGGTTCGCCG GCGGTTGGGT CAGCGCGACC ATTTTTGCCG ACAGCATCTC GCTCACGCGC CTGGTTCCGG CGATCGGTCC AGGATTGGTT GCCAATCAGG AAACGCCGCC ATCGCTCCGG CAGCAGTTCC GCGTCTTCTG GGAAGTGTGG AACCTGGTCG AGACCGAGTT CTATCAGCGC GACAAGATCA ACCACACCCG CATGATCCGC GGCGCCATCA CCGGCATGCT GGCATCGCTC GACGATCCGT ACACCGTCTA TCAGGAACCG GAGCTGGCAT CACAGACGAA TGAGCACATG CAGGGGCGAA TGGGAGGCAT CGGCACCTAT CTACGGATCA CCGACGGGCG CGCATTTCTC TACAAGCCAA TCAAAGGAGC GCCAGCCGAA GCCGCCGGTC TCAAACAGGA CGACGAGATC GTGGCGATTG ACGGCGAACC GGTCGCGCCG ATGATTGCCG GTCTCGACGT GAACGAAGCG GCTGTCAAGG TCGCATCGAA AATCCGCGGG CAGGCGGGTA CGCAGGTGCG CCTGACTATC CGGCGGCAAC CGGACGACCA GGTGTTCGAC ATCACTCTGA CGCGCGCCGA CATCGTGGTG CCCGGCGTCG AAGCCCAACT GGTCGATGGC GGAATTGCCT ATATTCGCAT TATCGAGTTC AAAGCCAATA CCGTCCCCGA ATTCGACCAG GCGCTGCGCG AGTTGCTTCC GCAAGCGCCA AACGGCATCG TCCTCGATAT GCGCAACAAC CCCGGCGGCT TCCTCGACCA GGCGCGTGCC GTGCTCGGGC GGCTCTACAA TGGGGTCGCG CTCTACGAGC AGAACAGCAA AGGGGAAATC ACCGAAATCC GCACCGTTGG CGGTGATATT CGCGCCTTCG ATGTCCCCAT CGTCGTGCTG GTCAATGGCA GTTCCGCCAG CGCCAGCGAG ATCGTCGCTG GCGCATTGCG TGACAGTCGT CCGAACGTGA CGCTGATCGG CGAGAAAACC TTCGGCAAGG GATCGGTGCA GAACATCTAC CACCTGAGCG ATGGCAGCAG TGCGCGAATC ACGTTCGCGC ACTGGCTCAC CCCGGCGCGC ACCGAAATCG ACAAGGTTGG CATTACGCCG CAGTACGTCA TTCCTTATGC CGAAGACCCT GCCACGCAAA CCCTGTGTGT CGGCGACCGC CAGCCGCCGC CGGGAGCGAC GACCTGCGCC GACAACCAGT TGTTCTACGC CATCCGGCTG CTGCGCACCG GCGAAGCGCC GCCATCGATG CCGGCGGCGG CACGGTGA
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Protein sequence | MAFRFRFLRR LAAASLFLLA GFAGGWVSAT IFADSISLTR LVPAIGPGLV ANQETPPSLR QQFRVFWEVW NLVETEFYQR DKINHTRMIR GAITGMLASL DDPYTVYQEP ELASQTNEHM QGRMGGIGTY LRITDGRAFL YKPIKGAPAE AAGLKQDDEI VAIDGEPVAP MIAGLDVNEA AVKVASKIRG QAGTQVRLTI RRQPDDQVFD ITLTRADIVV PGVEAQLVDG GIAYIRIIEF KANTVPEFDQ ALRELLPQAP NGIVLDMRNN PGGFLDQARA VLGRLYNGVA LYEQNSKGEI TEIRTVGGDI RAFDVPIVVL VNGSSASASE IVAGALRDSR PNVTLIGEKT FGKGSVQNIY HLSDGSSARI TFAHWLTPAR TEIDKVGITP QYVIPYAEDP ATQTLCVGDR QPPPGATTCA DNQLFYAIRL LRTGEAPPSM PAAAR
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