Gene Rcas_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2134 
Symbol 
ID5539614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2744052 
End bp2744921 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID640894268 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_001432237 
Protein GI156742108 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0629434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.037417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAA GTCCACTGCG CTATCCTGGC GGAAAGTCGC GCGCAATACA GCGCATGCTT 
TATCTGATAC CTGATTCATT CGATGAGTAT CGTGAGCCGT TTGTAGGCGG CGGTTCATTC
TTTATCTTGC TGAGGCAAAA GTACCCTGAT GTAAAGATGT GGATCAATGA TCTCAATACT
GAGTTGTTCT ACTTCTGGAA ATGTGCTCAG GAAGACTCCG CCAGACTGGC GCGTGAAGTT
ATGAAGATAA AGGTGGAGCG AGCAAACGGT AGGGAACTTT TTTATGAATT GCTGGGAATG
GATACGTCTA AGATGAGCGA GTTTGAGCGA GCAGTGAGGT TCTTTGTTCT AAACCGTATT
ACATTTTCTG GAGTGGTTGA AGCAGGAGGC TATTCTGAAG GAGCTTTTAT TGGAAGATTT
ACAAGGTCTT CAATAGAGCG ATTGGCTTTG CTAGGTGAAA TTCTGGAAGG TGTCAGGATT
ACCAATTCAG ATTATAAAGA TTTGTTGCAA GACGGTGATC AAAGGGTTTT TACCTTCCTG
GATCCGCCTT ACTTTGCAGC AACAAAATCA AGGCTGTATG GAAAGAACGG CATGCTCCAC
GAAATCTTCG ATCATTTCGA GTTTGCTGAA CAGATGAAGA AGTGTCGGCA CTCATGGTTG
ATTACATACG ACGACTCCCC AGAGATTCGT CAAAATTTTC ATTTTGCATA TATGCACCGT
TGGGAACTAC AGTATGGAAT GAACAATTAT AAGCAGCGCA AAGCCGAAAA AGGCGCTGAG
TTGTTTCTCT CCAACTATCC GCTTCCGATT GGTCAGGAAG CATCACCCGC CCTGCCGGAC
AGCGTGTTCA TCCAGCGCTC TCTGTGGTGA
 
Protein sequence
MIRSPLRYPG GKSRAIQRML YLIPDSFDEY REPFVGGGSF FILLRQKYPD VKMWINDLNT 
ELFYFWKCAQ EDSARLAREV MKIKVERANG RELFYELLGM DTSKMSEFER AVRFFVLNRI
TFSGVVEAGG YSEGAFIGRF TRSSIERLAL LGEILEGVRI TNSDYKDLLQ DGDQRVFTFL
DPPYFAATKS RLYGKNGMLH EIFDHFEFAE QMKKCRHSWL ITYDDSPEIR QNFHFAYMHR
WELQYGMNNY KQRKAEKGAE LFLSNYPLPI GQEASPALPD SVFIQRSLW