Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2131 |
Symbol | |
ID | 5539611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2740405 |
End bp | 2741562 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640894265 |
Product | hypothetical protein |
Protein accession | YP_001432234 |
Protein GI | 156742105 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000980684 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0372378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATTG GCGCTGACAT CGATCAACTC TACACAACCA TTGCACTGTT TCGGCGCAGC AGAGCAGAGA TGAGCGATAC ATTCCAGCGT GCGCGACAGG CGATGCAGGC GATGCAGAAC AGCCCATGGT CCGGGCAGAA TCGCCAGCAG GCTGAGGCGG TCTGGGAACA GATCCAGACT CAGTTTGCGT CTGTTATCGA CGAACTTGAA GGCTTGACTG CGCGCACCGA ACGATTTGCC AACAATCTGG CAGAGGCAGG GCGGAGTTTT TACGATCCGG CGCGTATCAA TACATCAGAT ACAATTGGTA AGGTGCTGAA GTATGCAGAG GTGGGTGCAG ATATTATACA AAAACTTAAA AAAATAATTG TAGGATCAAA ATATATTCGG GAAATAAAAT TGGTTAGAGA AGGTCTACAA ATAGTCCACG GTTCTACCTA TCCCAAACAA TTGATTTTGA AAGGTAGCCA CGAAGTATTC GAGATGGCGT TTCTCAACCC GCATCTTCGG CATTTGAAGG GAGAGTGGAA AAATATTGCT CAGAAACTTG TTCTTGACCC TACGAAGAAT GCCACAAAGG ATGCCGTTTC TGACGCTCTC AAGGTATTGC CCCTCGACTT TGCCCTTAAC GTCGCCTCTA ACGCATCTGA TAACTGGGAG GCCTACAAGG GCGATCCGCA GCACTGGCAA AAGGCGGTAG TTGGCACCGC AATCGATGCA ACCGTTGACA CAGCATTGTC GGCGGCCGGG ACAGTGGTCG GAACAGCGGT AGGCGGCGCA GTCGGTGGCG CGTTGCTCGG CGCGATCAGT GGCGGAACGT TAGCGCCGCT GGGCGTTGCC ATTGGCGCGC GAGTGGGTGG ATTCGCGGGC GGGTGGGCAG CAGAGAGGGT TAGCGAATGT CTAAAGGAGC AAGACTGGTA CAAAGATCTG AAAAAAGTTG GCGTTCAGAA GGGTGCTGAT TTCATCGATC AGAGCGTTCA GACAGCGCAA CAGACGATGG AGTCAGTCGC ACAAGAAGGT CAGCGGGTCC TGGAGCAGAC CCAGGAAAAA GTGGCAGCAA TCGCGGACAA AAGTCAACAG TTATTGGAGC AAGGACAACA GGTGCAGCAG GCAATGAGTG GCTGGGTTAG CCATAAATTG GGTCTTCAGT TCAGGTAG
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Protein sequence | MLIGADIDQL YTTIALFRRS RAEMSDTFQR ARQAMQAMQN SPWSGQNRQQ AEAVWEQIQT QFASVIDELE GLTARTERFA NNLAEAGRSF YDPARINTSD TIGKVLKYAE VGADIIQKLK KIIVGSKYIR EIKLVREGLQ IVHGSTYPKQ LILKGSHEVF EMAFLNPHLR HLKGEWKNIA QKLVLDPTKN ATKDAVSDAL KVLPLDFALN VASNASDNWE AYKGDPQHWQ KAVVGTAIDA TVDTALSAAG TVVGTAVGGA VGGALLGAIS GGTLAPLGVA IGARVGGFAG GWAAERVSEC LKEQDWYKDL KKVGVQKGAD FIDQSVQTAQ QTMESVAQEG QRVLEQTQEK VAAIADKSQQ LLEQGQQVQQ AMSGWVSHKL GLQFR
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