Gene Rcas_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2123 
Symbol 
ID5539603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2727034 
End bp2727315 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content56% 
IMG OID640894257 
Producthypothetical protein 
Protein accessionYP_001432226 
Protein GI156742097 
COG category[S] Function unknown 
COG ID[COG4842] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.656208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA TCAGTCTTGA TCCAGAACAG GCACGCTCGA CTGCATCCAC CTTTGATGGA 
TGTAAGGGAA CAATTGAGGG TGAATTGAGC CGCATGATGG GTTCGGTGAA CGAAGTGCTG
GCGACCTGGT CGGGGCAGAG TCGTCAGCAG TTTGAGGCAG AGTGGGATCA GTGGACGAAT
CGCCTGCGCA ATATGATGGA AGAGTTGCAG GGTCTGGCAA ACGGGTTGCG CCGCGAGGCT
GACGAGTTCG AGTCGGTGGA CCGGTCGTTT GTAAGCGCTT AA
 
Protein sequence
MAPISLDPEQ ARSTASTFDG CKGTIEGELS RMMGSVNEVL ATWSGQSRQQ FEAEWDQWTN 
RLRNMMEELQ GLANGLRREA DEFESVDRSF VSA