| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2117 |
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| Symbol | |
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| ID | 5539597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2720149 |
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| End bp | 2721390 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894251 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001432220 |
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| Protein GI | 156742091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.457647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGATCAA CGGTCATTAC CGCAGTCCAT GCCCGTGATG TTCGCTTTCC CTTAAAGCCG
GGCGAGGGAG TGGACGCCAT CCATACCAAC CCGCAGTACG CCTACGCAGT CACGCTGCTC
GCCACAAATA CATCCCTGCG CGGCACGGGG CTGGCCTTCA CGCTTGGCGC CGGCACCGAA
CTGGTCTGCG ATGCTATCCG CATGCTGGCG CAGCCGCTGG AGGGACGCGA GATCGAAGAG
TTGATGGCCG ATTTCGGTCG TCTCACTCGT CAGATCGCCG ATCATCCACA GATGCGCTGG
CTTGGTCCCC ATAAAGGCGT TGTGCATCTG GCGCTTGCCT CGCTGACGAA TGCCTGTTTT
GATTTATGGG CTAAAGCGCG CGGCGTGCCG CTCTGGAAAC TGTTGCTCGA TTTGACGCCA
GAAGCGATCA TGGCGCTTCT TGACCTGAGT TACCTGGAAG ATGTCCTCAC CCCGTCTGAG
GCGATCAATA TGCTGTATCG TGAAATGACT CACCGCAACG AACGCGCAGC AATTCTGACG
CAGGGATATC CCGGCTATGA CACCTCGGTC GGCTGGTTTC ATTACGATGA TCGGCAACTG
ATCGAAAATG CGCGGCGTGC TGCGGATGCC GGTTTTTCGG CTATGAAACT GAAGGTCGGC
TCACCCGACC CAGCCCATGA TATTCGTCGG GCGCTACTGG TCCGCGAGAC GGTAGGACGC
GACGTGCGCA TCATGCTGGA CGCCAACCAG CAATGGACGT TGCCGATGGC GCTGCACGCC
TGTCAGGAAC TTGCATCGAT GCAACCATAC TGGATCGAGG AGCCGACCCA TCCCGATGAT
GTGATCGGAC ACCAAACGCT TGCGCGATCA ATTGCGCCGC TTCGGCTGGC AGTCGGCGAA
CACCTTCCCA ATCGAGTGGT CTTCAAAAAC TATATGCAGG CCAATGCTGC TCATTTCATT
CAAGCAGACT GCACGCGCGT CGGCGGGGTT AGCGAGTTCA TCACGGTGAG TCTGCTCGCC
AGGCGCTTCA ACCTGCCGGT AGCGCCACAC GTCGGGGATA TGGGACAAAT TCATCAGCAC
CTGACACTCT TCAACCGGAT TGCGCTGGGA CACGAGACCG TCTTTCTTGA GTATATCCCG
CACCTGCGCG ATCGCTTCCG CTACCCGGCA CAGGTTGAAG ATGGCGTCTA TCGCACACCA
CAGGAGCCAG GCAGCAGCGC CGATTTAATC GATTGCACCT GA
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| Protein sequence | MRSTVITAVH ARDVRFPLKP GEGVDAIHTN PQYAYAVTLL ATNTSLRGTG LAFTLGAGTE
LVCDAIRMLA QPLEGREIEE LMADFGRLTR QIADHPQMRW LGPHKGVVHL ALASLTNACF
DLWAKARGVP LWKLLLDLTP EAIMALLDLS YLEDVLTPSE AINMLYREMT HRNERAAILT
QGYPGYDTSV GWFHYDDRQL IENARRAADA GFSAMKLKVG SPDPAHDIRR ALLVRETVGR
DVRIMLDANQ QWTLPMALHA CQELASMQPY WIEEPTHPDD VIGHQTLARS IAPLRLAVGE
HLPNRVVFKN YMQANAAHFI QADCTRVGGV SEFITVSLLA RRFNLPVAPH VGDMGQIHQH
LTLFNRIALG HETVFLEYIP HLRDRFRYPA QVEDGVYRTP QEPGSSADLI DCT
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