| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2115 |
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| Symbol | |
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| ID | 5539595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2717916 |
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| End bp | 2719010 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640894249 |
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| Product | sugar ABC transporter, periplasmic sugar-binding protein |
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| Protein accession | YP_001432218 |
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| Protein GI | 156742089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.841863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAC AATGCAGGAA CACGTTGTCA AGGCACATCA CAGGACTGAT GGCGTTAGCG
TTCATCCTGG CGGCATGTGG AGATCCAGCA GCAACCGCTC CCACACCTGC CAGCATCCAA
ACAGAAGCAA CGGGAGCGCC TCCTACTGTT GTCCCGCCGA CAACCGGCGC GTTCAAGCCG
GTCTGGTATG CGCCGGCGCC ACACCCCTAC TTTGAAGAAG TACGCAAAGG CGTAACAGCC
TTCGAAGCCG ACACCGGCAT TAAGGTCGAA CAACAGATCG GGCCCGACTG GACCCAGGGG
AGCCAGAACC AGCGCATAGA AGCGCTGGCA GCGCAGGGAT TCAATGCTTT CGCCGTCTAT
CCAGCCGATG CCAGCGGCGC CAACGGACTC TATGAAGAGT TGACAACAGC AGGCGCGCAC
ATTATCAACT TCGGCACATC GACGGCACAG CCAACCACTG CCTCGTTTGC AGTGGCGACC
GATGTCAAGG CGGCTGCCAT GCAGGCGACG GAAGAGTTGA TCAAAGCAAT GGGAGGCAAA
GGCAACATCA TCAATGTGCT GGAAGTGCTC GAAGACCCTA ATACAGCACT GCGCAAACAA
GGAATCGAAG AGGTGGTCGC CCGTTATCCC GATGTGACCA TCATTCAAGA GGTGGCGGGC
ATGACCAGCA TTGAAACGGC GGTGCAAAAA ATAAGCGATG CCCTGTCAGC CAATGTTGAT
CGGGTTGATG GAATCATCGC CACCGGCTAT ACGCCCAGTG TGGCTATCGC GCAGGTCTTG
ACCGAATACC GGGCCAGGGG AGGTCAACGT CAGATTCACG CCGTTGGCAT CGATACTGAC
GAAGCGGTCA TGAAGGCGAT CGCTGACGGT GTGATGGACG GCACTATTGT TCAGAATCCA
TTCGGTCACG GATACCTGAG CCTGCTCCTG CTCAAGTATT TATCGGAAGG CTACAAGCCG
AAAGCGGATG CATACTTCGT CAACGCCGGC TTTATCTTCG TCACAAAGGA GAATCTCGAC
ACCTACCAGC AAGATATTCT TAAGGTCACC GAACAGATCA AGTCCGAAAT GCTCGATAAG
TATCTCGAAC GCTAG
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| Protein sequence | MTKQCRNTLS RHITGLMALA FILAACGDPA ATAPTPASIQ TEATGAPPTV VPPTTGAFKP
VWYAPAPHPY FEEVRKGVTA FEADTGIKVE QQIGPDWTQG SQNQRIEALA AQGFNAFAVY
PADASGANGL YEELTTAGAH IINFGTSTAQ PTTASFAVAT DVKAAAMQAT EELIKAMGGK
GNIINVLEVL EDPNTALRKQ GIEEVVARYP DVTIIQEVAG MTSIETAVQK ISDALSANVD
RVDGIIATGY TPSVAIAQVL TEYRARGGQR QIHAVGIDTD EAVMKAIADG VMDGTIVQNP
FGHGYLSLLL LKYLSEGYKP KADAYFVNAG FIFVTKENLD TYQQDILKVT EQIKSEMLDK
YLER
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