| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2114 |
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| Symbol | |
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| ID | 5539594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2716338 |
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| End bp | 2717852 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640894248 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432217 |
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| Protein GI | 156742088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAG TTCATCGGAT CACCAAAACA TTCCCTGGCG TCCGGGCGCT GTCCGATGTT
TCTATCGACT TTGCGCCCGG CAAGATTCAC GCGCTCGTCG GAGAAAACGG CGCTGGCAAA
AGCACGCTCA TCAAAATCAT CGGGGGCATT TACTCGCCAG ATTCAGGCAA GATCATCCTC
GACGGAATGA CGCTGCATCT GCGTTCCTCT AAGGATGCGC TGGTCCATCA TATCAATCTG
GTAAGCCAGG AAATTCAGGT CATTCCCAGA AGCACGGTGG CGGAAAATAT TATGCTCGAC
AAACTTGACC GCTACCAGCG GCGTGGACAC ATCGACTGGA CGCGCCTGAA GCGGGATGCT
GCCGAGTATG CGCAGATGGT CAACCTCACC ATCCCGGTAA CGCAGACGGT CGCCGATCTT
AGCGTTGCGC ACAAGCAACT GATAATGATC GCACGTGCAC TTTCCGCCAA TGCACGTGTC
TTGATCATGG ACGAACCAAC ATCAACCCTG ACACCGCACG AATCTGACAA CCTGCTGACA
CTGCTTCGTC GTCTGAAGAA CAATGGGGTC ATCGTGATCT TTGTATCCCA CAAACTGGAA
GAAGTCCTCG CCATCGCCGA CACGGTCTCC GTCCTGCGCG ACGGTGTGCT TATCGGGACC
CAACCGGCGA CGGGGCTGAC CAGGGGGCAA ATTATTCACA TGATGATCGG ACGTGATGTC
CGTGCGCTCG AATTAACGCC GCTGCCGGTC AATGCCACTG ACGTGGTGCT GGAAGCGCGC
AATATCTGCC AGCGAGGACG CTTTCACAAC ATCAGTTTTA CGCTGCGGCG CGGCGAAATT
CTTGGCTTCT ACGGAATGGT CGGTTCTGGA CGCACCGAAC TGGCGCACAT TCTGATTGGT
GAGCAGCGGA TGGATAGCGG CCATGTGCTG ATCCACGGTA AACCAGCCCG TATCCGCACG
ATGGCCGACA GCCTGTTCAC ATATCGCATG GGGTATATCT CTGAAAACCG CAAGGAGCAA
GGACTCATCC TCAGTGCATC GATCAAGACG AACATTGCGA TAACTATCTG GCACAATCTG
CGCGATCGTC TCGGTTCCAT TCGACCGGCA GCCGAAACCG CTATCGCGCG TGAGTTCATG
CAGAATCTGG ATATTCACGC GCTCGATCCC GATCAATCCG TGAGCCTTCT GAGTGGCGGC
AACCAACAAA AAGTAAGCAT CGCCAAATGG CTGGCGGCAC AGTGTAACAT CCTGATAATC
GACGAGCCGA CGATTGGGGT TGATATTGGC GCAAAAGAGT ATATTCATCG GTTAATTTGG
CGACTGGCAG CGCACGAAGG TAAATCGATC ATTCTCATCT CCTCGGACCT GCCGGAGATC
ACTGCATTGG CACGACGCAT TCTGGTCTTT CGTAATTTCC GCATTGTGGG TGAAATCTGC
AATAACGGCG AAAACAATGC TCCGGTGCGT GGCTACGATG ACATCAGCCA GGAGATCGCA
CATCTGCTTA CGTAG
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| Protein sequence | MLQVHRITKT FPGVRALSDV SIDFAPGKIH ALVGENGAGK STLIKIIGGI YSPDSGKIIL
DGMTLHLRSS KDALVHHINL VSQEIQVIPR STVAENIMLD KLDRYQRRGH IDWTRLKRDA
AEYAQMVNLT IPVTQTVADL SVAHKQLIMI ARALSANARV LIMDEPTSTL TPHESDNLLT
LLRRLKNNGV IVIFVSHKLE EVLAIADTVS VLRDGVLIGT QPATGLTRGQ IIHMMIGRDV
RALELTPLPV NATDVVLEAR NICQRGRFHN ISFTLRRGEI LGFYGMVGSG RTELAHILIG
EQRMDSGHVL IHGKPARIRT MADSLFTYRM GYISENRKEQ GLILSASIKT NIAITIWHNL
RDRLGSIRPA AETAIAREFM QNLDIHALDP DQSVSLLSGG NQQKVSIAKW LAAQCNILII
DEPTIGVDIG AKEYIHRLIW RLAAHEGKSI ILISSDLPEI TALARRILVF RNFRIVGEIC
NNGENNAPVR GYDDISQEIA HLLT
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