| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2100 |
|---|
| Symbol | |
|---|
| ID | 5539580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2697461 |
|---|
| End bp | 2698024 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640894235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432204 |
|---|
| Protein GI | 156742075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.857066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CACTGCCGGA AGACTCCAAT ACAGCCCATC CATTGCGTGA AGCGTCGAGC
CAGGTGATTG GCGGAACGCT ATTCGAGCGA CTGATCGAGC AGGCGCGCGC TGCCAACCAG
CCGCAGCGCG GCGCGCCAAA CCAGAACGAT TTTGAGACGC TGGTCGACCG TCTGATCGAG
CAGGCGCGCG CGGATGGCGC ATTCGATAAC CTTCCCGGCG CCGGCAAACC GCTCCGCTAC
GATGATGATG CCCTCACTCC CGAAGATATG CGCGCCGGGT TTCGTTTGTT GAAGAACGCT
GGCTTTGCGC CGCTCTGGAT CGAAGCGCGC CGCGACATCG ACGCCGAGCG TGCACGCATC
TCCGCATGGC TCCAGAACGC CAACCGCCGC TGGTCACGCC TCCCGCCTGC TATTCGTGCC
CGTTTGCGCG CTGAGTATCG GGAGATGCTC ACGAACCTGC AACGCCAGAT TGCCTCGTAT
AATCTTATTG CTCCAACGGC GGCGGGGCAG ATCGAAGGTC TGCGCATCGA GGACGAAGTG
CGCAAGCTAG GGGAGCAGGC ATGA
|
|---|
| Protein sequence | MTDPLPEDSN TAHPLREASS QVIGGTLFER LIEQARAANQ PQRGAPNQND FETLVDRLIE
QARADGAFDN LPGAGKPLRY DDDALTPEDM RAGFRLLKNA GFAPLWIEAR RDIDAERARI
SAWLQNANRR WSRLPPAIRA RLRAEYREML TNLQRQIASY NLIAPTAAGQ IEGLRIEDEV
RKLGEQA
|
|---|
| |