| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2097 |
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| Symbol | |
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| ID | 5539577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2691768 |
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| End bp | 2693468 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894232 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001432201 |
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| Protein GI | 156742072 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.564619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACC TGGCATATGC CTCAACACCC TGGCTCACAT TGCTGATCCT GTCGCCGCTG
ATCGGGCTGG CGCTGACCGG GCTGGCAGGT GCGCTGCGGC TCGACGACCG GACGGTGAAG
ATCGGCGCTA CGGCGTGGTC GACCATTCCC CTGGCGCTGG CGATTGTCGT CTGGGTGGGG
TTCGACCCGA ATGCGACTGC CGATGGACAG GGGGTTGTGC AGTTCGTCGA GAAGATTCCG
TGGGTGCAGG CGATCCGGGT TGATTATTTC GTCGGAGTGG ACGGAATCAG TATGCCGCTG
GTCATTCTCA CGGCGGCGAT GGCGCCGGTG GCAATGCTGG CATCGTTTGG CATCACTGGG
CGGGTGAAAC TGTACATTGC GCTCATGTTT CTGCTGGAAG CGGCGATGCT GGGATATTTC
CTGGCGCTCA ATTTCTTCTT TTTCTTTATC TTCTGGGAGT TCAGCCTCGT GCCAGCGTAT
TTCCTCATCC AGGGATGGGG TCGTCGTCAT GGCGCCGATG CCGATCCTGA GCAACGCCGC
CGTGATGCTG CGCTCAAGTT CTTCGTCTAC ACGATGGCCG GGTCGATCGG TATGCTGCTG
CTCTTCCAGT TTTTCTATGT TGCCACGGCT GCGGCCGGCA TCCCGACGTT CGACCTGATC
ACACTGGCGC GTCTGGGACA GGGGCTGACC GTCGAACGCG CGGCGCTCGA TCCGGTGAAT
TTGACGTTGC GCGAGATCAT CTTCAACTAT GTCGAGCAAC TGGGGATTGC CGCTGTACTT
GGGCGCTACC CGCTGCTCTA TACATCGATT GCGTTCTGGG CGATCTTCAT CGCATTTGCG
ATTAAGCTTG GCATCTGGCC CTTCCACACC TGGCTGCCCG ACGCCTATAG CGAAGCGCCG
ACGGCAGCAT CCATCCTGCT GGCGGCGGTG ATGTCGAAAA TGGGCGCTTA CGGCATGCTG
CGCCTGATGC TGCCCTTCGT TCCCGACGCA GCGCAGTACT TTGGTCCGGC AATCGGTGCG
CTGGCGCTGA TCGGTGTGGT GGCAGGCGCC TTCGGCGCGC TCGGTCAGGT CGGTGGCGAT
CTGAAACGCC TGATCGCCTA TACCTCGATC AACCACATGG GGTATGTCGG TCTGGCGATT
GCAGCGGCGG CGACCGTCGG GTCGGCGGAT AGCGCCACCC GAGCGACGGC GATCAATGGC
GCGCTGTTTC AGATGGTGGC GCACGGTCTT TCGACCGGTG CGCTCTTCTT GCTGGCGGGC
ATGCTCGCTG AACGCTGCGG TTCCGACGAG ATGGGGACGC TTGCCGGTTT GCGCACCACG
ATGCCGGTTT TCGCCGGAGC GATGGGGGTG GCGACGTTCG CCAATCTGGG GTTGCCCGGT
CTTGCCGGGT TCGTCGGCGA ATTCTTCATC TTCCGTGGTG TATGGGCGTC GTTGCCCCTT
TTTGCGCTCC TGGCGACGAT CGGGCTGGTC GTGACAGCGC TGGCGCTGTT GCGCATGTAT
GGGCAGCTAT TCCACGGCAA AACCAATGAG CGTAGCGCCA TGCCTGATAT GCGCCTCGCC
GGGCGCGAGT TTCTGGCGGT TGCGCCGCTG CTGATTGCAC TCCTGATTCT GGGCGTGTAC
CCAGCGCCCA TTATGGACCT GTCGAACCGG ACGGCGACCG CACTGGTGGA AGTGTTCACC
CGGGTTGTGG GAGGAGCATA G
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| Protein sequence | MTYLAYASTP WLTLLILSPL IGLALTGLAG ALRLDDRTVK IGATAWSTIP LALAIVVWVG
FDPNATADGQ GVVQFVEKIP WVQAIRVDYF VGVDGISMPL VILTAAMAPV AMLASFGITG
RVKLYIALMF LLEAAMLGYF LALNFFFFFI FWEFSLVPAY FLIQGWGRRH GADADPEQRR
RDAALKFFVY TMAGSIGMLL LFQFFYVATA AAGIPTFDLI TLARLGQGLT VERAALDPVN
LTLREIIFNY VEQLGIAAVL GRYPLLYTSI AFWAIFIAFA IKLGIWPFHT WLPDAYSEAP
TAASILLAAV MSKMGAYGML RLMLPFVPDA AQYFGPAIGA LALIGVVAGA FGALGQVGGD
LKRLIAYTSI NHMGYVGLAI AAAATVGSAD SATRATAING ALFQMVAHGL STGALFLLAG
MLAERCGSDE MGTLAGLRTT MPVFAGAMGV ATFANLGLPG LAGFVGEFFI FRGVWASLPL
FALLATIGLV VTALALLRMY GQLFHGKTNE RSAMPDMRLA GREFLAVAPL LIALLILGVY
PAPIMDLSNR TATALVEVFT RVVGGA
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