Gene Rcas_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2094 
Symbol 
ID5539574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2687348 
End bp2688001 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID640894229 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001432198 
Protein GI156742069 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC TGATTACGGT TCTTTTTCTG ATCTTTGCCG CGCTCATCCT GGCGTCTGCG 
ATCTTGACCG TTACGGTGAA GAATATTGTG CATGCGGCGC TCTGGCTGAT TTCGTCGTTT
TTCGGGGTCG GCGCGCTCTA TCTGTTGATG GAGGCGGAGT TTCTCGGCGT GGCGCAGGTG
CTGATCTACG TCGGTGCGCT GTCGATCCTG ATCCTGTTCG CCATTATGCT GACGCGCGAT
CTGGAAGGAA GCCAGAATCG GCAACTGACG CCGCGCTGGT GGATTGCGTT GATTGTGCCG
GCGGCGCTGT TTGGCCTTCT GATTGTGCCG ACGGTCATGA CCCATGCCTG GCAACTCCCG
CCGCCGCCGC CAACCGGTCA ACCGCCGGCT ATCTCGGGTG CGCAGCAAAT TGGTACGGCA
TTTATGCGTG AGTATCTCCT GTCGTTTGAA GTGGCGGCGA TCTTGCTGAC GGTGGCGATG
ATCGGTGCTA TCGTCATCGC TTTCGAGGAA CGCGAACGCC GGCGCCGTGT GCTGACCCTG
GCGGAGCAGG TGCGCCTGCG CCAGCAGCAA CGGCAACAAC CGCAACCTGC GCCGCGCCCC
GAACCGGCTG CGACGGCTAT CCAGGCGTCG GAAGCGACTG GCGGTGAGAC GTGA
 
Protein sequence
MNTLITVLFL IFAALILASA ILTVTVKNIV HAALWLISSF FGVGALYLLM EAEFLGVAQV 
LIYVGALSIL ILFAIMLTRD LEGSQNRQLT PRWWIALIVP AALFGLLIVP TVMTHAWQLP
PPPPTGQPPA ISGAQQIGTA FMREYLLSFE VAAILLTVAM IGAIVIAFEE RERRRRVLTL
AEQVRLRQQQ RQQPQPAPRP EPAATAIQAS EATGGET