Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2094 |
Symbol | |
ID | 5539574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2687348 |
End bp | 2688001 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894229 |
Product | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 |
Protein accession | YP_001432198 |
Protein GI | 156742069 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGC TGATTACGGT TCTTTTTCTG ATCTTTGCCG CGCTCATCCT GGCGTCTGCG ATCTTGACCG TTACGGTGAA GAATATTGTG CATGCGGCGC TCTGGCTGAT TTCGTCGTTT TTCGGGGTCG GCGCGCTCTA TCTGTTGATG GAGGCGGAGT TTCTCGGCGT GGCGCAGGTG CTGATCTACG TCGGTGCGCT GTCGATCCTG ATCCTGTTCG CCATTATGCT GACGCGCGAT CTGGAAGGAA GCCAGAATCG GCAACTGACG CCGCGCTGGT GGATTGCGTT GATTGTGCCG GCGGCGCTGT TTGGCCTTCT GATTGTGCCG ACGGTCATGA CCCATGCCTG GCAACTCCCG CCGCCGCCGC CAACCGGTCA ACCGCCGGCT ATCTCGGGTG CGCAGCAAAT TGGTACGGCA TTTATGCGTG AGTATCTCCT GTCGTTTGAA GTGGCGGCGA TCTTGCTGAC GGTGGCGATG ATCGGTGCTA TCGTCATCGC TTTCGAGGAA CGCGAACGCC GGCGCCGTGT GCTGACCCTG GCGGAGCAGG TGCGCCTGCG CCAGCAGCAA CGGCAACAAC CGCAACCTGC GCCGCGCCCC GAACCGGCTG CGACGGCTAT CCAGGCGTCG GAAGCGACTG GCGGTGAGAC GTGA
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Protein sequence | MNTLITVLFL IFAALILASA ILTVTVKNIV HAALWLISSF FGVGALYLLM EAEFLGVAQV LIYVGALSIL ILFAIMLTRD LEGSQNRQLT PRWWIALIVP AALFGLLIVP TVMTHAWQLP PPPPTGQPPA ISGAQQIGTA FMREYLLSFE VAAILLTVAM IGAIVIAFEE RERRRRVLTL AEQVRLRQQQ RQQPQPAPRP EPAATAIQAS EATGGET
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