Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2089 |
Symbol | |
ID | 5539569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2681937 |
End bp | 2682743 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894224 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001432193 |
Protein GI | 156742064 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.580688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATG ATCGTGATAT CCAGCTCGAA GCGGAAAAGC AGGGCGTCTT TTTGACGACC ATGCAGCGAT TTTATAACTG GGGGCGGCGT TCGTCAGTCT GGCCCCTATC GTTTGGGCTT GCATGCTGTG CCATTGAAAT GATGGCGACC GGTCTGGCGC GCTTCGACCT GGCGCGCTTT GGGGCTGAGA TGTTTCGGGC GTCGCCGCGT CAGGCAGACC TGATGATCGT CGCGGGGACG GTCACGAAGA AGATGGCGCC GCAGGTGGTG CGTCTCTACA ATCAGATGCC CGAACCGCGC TATGTCATTT CGATGGGCGC CTGCGCGACA TCCGGCGGCC CGTTCCGCGA TGGGTACAAT GTGTTGCGCG GCATTGATCT TCTGATCCCG GTTGATGTCT ATATTCCCGG TTGCCCGCCG CGCCCCGAAG CTCTGCTCCA CGCCTTGATG ACATTGCAGA AGCAGATCGA TGCGCAACGC CTGAACCGGG TGCGCTGGTA TGGCAAACGC GAGGCGAAAG AGTATCCGGT GCCGGCATTT GGTAAACATG GGTTGGAGAT CGATGGCAAA CTGGTCGATC CGGTTGGCGG GTTGCCGCTT ATCAGCCCAT ATACGTCGCC AACTCACGGC GAAATGCGCT CCGGCGAGAT CGAACACCCG GAACTGGTGC GCCATTTCCC GATTATGGAC GAAACGGTCG AACTGGAATC GCCCAACAAG GCGAAAGGTG TTGCGCCGGA GATTCGGCAT AACGACCTGA AACGCCCTGC TGTCGAGGTG GATCATGCCC GTGATGAGCA GCGCTGA
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Protein sequence | MSDDRDIQLE AEKQGVFLTT MQRFYNWGRR SSVWPLSFGL ACCAIEMMAT GLARFDLARF GAEMFRASPR QADLMIVAGT VTKKMAPQVV RLYNQMPEPR YVISMGACAT SGGPFRDGYN VLRGIDLLIP VDVYIPGCPP RPEALLHALM TLQKQIDAQR LNRVRWYGKR EAKEYPVPAF GKHGLEIDGK LVDPVGGLPL ISPYTSPTHG EMRSGEIEHP ELVRHFPIMD ETVELESPNK AKGVAPEIRH NDLKRPAVEV DHARDEQR
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