Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2088 |
Symbol | |
ID | 5539568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2681114 |
End bp | 2681470 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640894223 |
Product | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 |
Protein accession | YP_001432192 |
Protein GI | 156742063 |
COG category | [C] Energy production and conversion |
COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.81296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCGG ATTATGCGTT TATTGGCGTG TTCTTCATCG GTGCGGTCAT CTTTCCGCTC GTGCCGCTGG TGGCCGCGTA TTTCCTTGGA CCCAAACGCC CTACGCCGAT CAAGCTCGAC ACGTATGAGT GTGGGCTGGA AGCGGTGGGC GACATTCGGG TGCAGTTCAA GATTCAGTAC TATCTGTATG CACTGGCGTT CGTTATCTTC GATATCGAAG TGGTCTTTCT GTACCCATGG GCAGTCGCAT ATGGGCAGAT TGGGCTGTTC GCGTTGATTG CAATGGCGAT CTTTCTCGTC ATTCTGGTCG GTGGTCTGGT GTACGAATGG AAGAAGGGTG CGCTCGAGTG GGTGTAG
|
Protein sequence | MLADYAFIGV FFIGAVIFPL VPLVAAYFLG PKRPTPIKLD TYECGLEAVG DIRVQFKIQY YLYALAFVIF DIEVVFLYPW AVAYGQIGLF ALIAMAIFLV ILVGGLVYEW KKGALEWV
|
| |