Gene Rcas_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2078 
Symbol 
ID5539558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2668352 
End bp2669107 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID640894213 
Producthypothetical protein 
Protein accessionYP_001432182 
Protein GI156742053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCGC TCATAACACT TGCTGCCACG ATTGCAGTCC TGTTGGTGGT TGCCGGATGC 
GGTGTGGCGT TGGCGGCGAT GTACCCGCGC AGGCGCACAG CGGCGTCGGG CAGCACTGCG
TTCCCGCGAT TGTCGTCGAT GGCGCCGCGC ATCTCGGGCG AACCGGAGTT TTTGTCGCGC
CTGCCGTATA CGCGCACCAC GCATCTGCTG ACGGGCGACC ACCGGGCGTT GTTTGCGGCG
CTCAACGCCG CTGCGCCCGA TGATCTCGCC GTGCTGCCCC ACGTGCGCCT GGCTGATATT
CTGTCCGTCG AACCACACAC GACGCAACCG GAGCGCTACC GGGAGCGCAT CCGCGATGTC
GTTCTCGATG TTGTGCTCTG TGATGCGCAG ACAACCGCAC CGCGCCTGGC GGTGCTCTTT
GCGCAGCCCG GCGCAGCCCG GCGGGCTGCA TTCATCGATG CTGCACTGAT CAGCGCCGGC
GTACCGGTGC TGCGCCTGAC CCGCGATGAG CCGCCATCGG TCGATGCGCT GGCCCTTCAG
ATTGCAGCGG CATTAGGCAT GCCGGCGCGA TGTTCGTCGT TTCCGGCAGA ATGGCCGGCG
CCTGACGAAC AACGGAATGG CGCAGCAGTC ATCTCGATGC CGGAGGTGAT TGGCGTGCCG
CGCGAGCCGG TGCGCTATGC CTGCGGACGC TGCCATCGCT ATGTGGCGCC GCGCGCGCGC
CGCTGCCCGC ATTGTGGGGC GACGCTGGCT GCATAG
 
Protein sequence
MESLITLAAT IAVLLVVAGC GVALAAMYPR RRTAASGSTA FPRLSSMAPR ISGEPEFLSR 
LPYTRTTHLL TGDHRALFAA LNAAAPDDLA VLPHVRLADI LSVEPHTTQP ERYRERIRDV
VLDVVLCDAQ TTAPRLAVLF AQPGAARRAA FIDAALISAG VPVLRLTRDE PPSVDALALQ
IAAALGMPAR CSSFPAEWPA PDEQRNGAAV ISMPEVIGVP REPVRYACGR CHRYVAPRAR
RCPHCGATLA A