Gene Rcas_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2075 
Symbol 
ID5539555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2661814 
End bp2662782 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content64% 
IMG OID640894210 
Productalcohol dehydrogenase 
Protein accessionYP_001432179 
Protein GI156742050 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAA TCCGTGTTCA CGAGCATGGC GGACCAGAAG TGCTGCGTCT GGACGATATT 
CCCGTTCCAG AACCCGGACC GGGCGAGGCG CGGGTCAGGA TCGCAGCGGC AGGAGTAAAC
TTCATCGATA TTTATCACCG CAGCGGGCAG TACAAAGGCG CCCTGCCGAT GACCCTCGGC
ATGGAAGCCG CCGGGGTTGT CGATGCCGTC GGTCCCGATG TCAACGACGT GCGCGTCGGC
GACCGGGTGG TGTACGCCAT GCGACAGGGC GCATACGCCG AATATGCGAT CGTTCCGGCA
GCGATGCTGG CGCCGGTTCC TGAAGGCGTC GATCTGCAAC AGGCGGCAGC AGTGATGTTA
CAGGGCATGA CGGCGCACTA CCTGGCATAT AGCACCTACC CGCTGCGCCA GGGTGATGTG
GCGCTGATCC ATGCTGCGGC TGGCGGCGTC GGCTTACTGC TGGTGCAGAT TGCAAAACGG
TGCGGTGCAC GGGTGATCGG CACGGTTTCA ACGGAGGAAA AGGCTGCTCT GGCGCGCGCC
GCCGGCGCCG ACGACATGAT CCTCTATACG CAGGAGGATT TCAGCGCGGC AGTGCGTCGC
CTGACCGACG GCGCCGGCGT TCACGTCGTG TACGACTCGG TCGGCAAGAC GACCTTCGAG
GGAAGCCTGA ACTGTTTGCG GCCACGCGGC TACATGGTGC TGTTCGGGCA ATCGAGCGGC
GCCGTTCCGC CATTCGATCC GCAGGTGCTG AATGCGAAGG GGTCGCTCTT CCTGACGCGC
CCGTCGCTCG GGCATTACCT GCTGACGCGC GACGAATTGC TCTGGCGCGC CGGCGATCTT
TTTAAGTGGA TGGCAGCGGG CGAACTGAAG GTGCGCATCG ACTCGACCTA TTCGCTGGAA
CAGGCGGCGG AGGCGCATCG CGCCCTGGCG AGCCGCGCCA CAAGCGGAAA GTTGCTGCTG
CTGCCATGA
 
Protein sequence
MRAIRVHEHG GPEVLRLDDI PVPEPGPGEA RVRIAAAGVN FIDIYHRSGQ YKGALPMTLG 
MEAAGVVDAV GPDVNDVRVG DRVVYAMRQG AYAEYAIVPA AMLAPVPEGV DLQQAAAVML
QGMTAHYLAY STYPLRQGDV ALIHAAAGGV GLLLVQIAKR CGARVIGTVS TEEKAALARA
AGADDMILYT QEDFSAAVRR LTDGAGVHVV YDSVGKTTFE GSLNCLRPRG YMVLFGQSSG
AVPPFDPQVL NAKGSLFLTR PSLGHYLLTR DELLWRAGDL FKWMAAGELK VRIDSTYSLE
QAAEAHRALA SRATSGKLLL LP