Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2072 |
Symbol | |
ID | 5539552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2657757 |
End bp | 2658893 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894207 |
Product | hypothetical protein |
Protein accession | YP_001432176 |
Protein GI | 156742047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA TACCAACGGA AACCATTGCG GCAATCCACG ATACGCCGCA CCGACTGGTG TTCGAGTTCG CCGGCGCCGG CAGCCTGGCG CTCTATTGGC TGCACAGCGT GCCTGGCTCA TCGCGCACTG TGCTGGAAGC GACCGACCGG TACGCAGCGA CATCGCTCAC CGACCTGATC GGCAAGACGC CGGAAAAGTT TGTTTCTGCC GACACGGCGC GCATCATGGC TGAGATGGCG TACCGCCGCG CCATGCGCCT GACCGACGGC GCCGCTGCGT GCCTCGGAGT CGCCTGCACC GCCGCGATTG CCACCGATCG CGCCAAACGC GGCGCGCACG GCTGTTCTAT TGCCGTGTAC GACGGCACAA CGATGCGCGC GTTCAACCTG ACGCTCGCCA AAGGCGCGCG CGACCGCGCC GGCGAGGAAC AGGTGATCAG CCTGCTGATT ATACGCGCAA TCGCCAGCGC TTGTGGCGTC GCTGCGCCCG ATCTTGCGCT GGAACCTCCC GAAACGCTGG AGGTGGATGA GGAGACGCGA CCCGATCCGC TGACGCTTCT TGTGCAGGGG GATGTCGAAG ACGTTTTTAT CGACATCGAT GGGCACGCAC ATCTGAAAGG GACACCGCCG GTCGCACTGC TGTCCGGTTC GTTCAACCCG CTCCACGCCG GGCACGAACA ACTGGCACAA GCAGCCGCAG CCTTCCTGCG CGTACCGGTT GTTTTTGAGC TCCCCATTCT GAACGCCGAC AAGCCGCCAC TCGGATATGC CGAACTGGAA CGCCGCCTGG AGCAGTTTCG CGGACGTTAC CCCGTCGTGC TCAGTCGCGC ACCGCTCTTT GTGCAAAAAG CGAACCTGTT TCCAGGATGC ACCTTCGTCA TCGGATACGA TACCGCAATT CGAATCATCG ATCCGCGCTA CTACGATGGC GAAGCCGGAC GCAACGCCGC CTTCGCCGCT ATCGCCGCCC ATGGATGCAC ATTCCTGGTC GCCGGGCGTA TCAAGGATGG CGTCTTCCGT ACCCTGGCAG ATATCGACCT GCCGGCTTCA TTGCGTCCAC TCTTCCGTGA ACTGCCTGAG CGCATATTCC GCGTCGATCT CTCCTCGAGC GCCATCCGCA ACGCTTATGG CACATAA
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Protein sequence | MNLIPTETIA AIHDTPHRLV FEFAGAGSLA LYWLHSVPGS SRTVLEATDR YAATSLTDLI GKTPEKFVSA DTARIMAEMA YRRAMRLTDG AAACLGVACT AAIATDRAKR GAHGCSIAVY DGTTMRAFNL TLAKGARDRA GEEQVISLLI IRAIASACGV AAPDLALEPP ETLEVDEETR PDPLTLLVQG DVEDVFIDID GHAHLKGTPP VALLSGSFNP LHAGHEQLAQ AAAAFLRVPV VFELPILNAD KPPLGYAELE RRLEQFRGRY PVVLSRAPLF VQKANLFPGC TFVIGYDTAI RIIDPRYYDG EAGRNAAFAA IAAHGCTFLV AGRIKDGVFR TLADIDLPAS LRPLFRELPE RIFRVDLSSS AIRNAYGT
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