Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2070 |
Symbol | pgk |
ID | 5539550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2655583 |
End bp | 2656770 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894205 |
Product | phosphoglycerate kinase |
Protein accession | YP_001432174 |
Protein GI | 156742045 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA AGACGATCCG CGACATCGAT TGGAGCGGCA AACGCGCTCT TGTTCGCGTC GATTTCAATG TGCCGCTGGA GAACGGGCAG ATCACCGACG ATACCCGCAT CCGTGCAGCA CTTCCAACGA TCCGCTACCT GCTGGAACAT GGTGCAGCCG TCATTCTTAT GTCGCACCTG GGGCGACCGA AGAATAAAGT CGTCGAAAGC ATGCGCCTGG CGCCGGTGGT GGCGCGCCTG GCGGAACTGC TCCCCGAAGC GAAGGCGGTC AAAGGCTCAC AGGCAACCAC CGGTCCTGCG GCTGAGGCGG CTGCGCGCGA CCTCAAACCG GGCGAGGTGC TGGTGCTCGA AAACACCCGA TTTGACCCGC GCGAGGAAGC CAACGACGAA AGTATGGCGC GCGAACTGGC AAAACTTGGC GATGTCTACG TCAACGACGC CTTCGGCTCG GCGCACCGCG CCCATGCCTC GACTGAAGGC GTGGCGCGAT TCCTCCCCGC TGTCGCCGGC TTCCTGATGG AAGCCGAACT CGCCGCGCTC CAGGGAGCGC TGGAAAATCC GGCGCGGCCA TTTGTCACTA TCATCGGCGG CGCCAAGATC AGCGACAAAA TTGGCGTGAT CGAAAACCTG CTCGGCAAAG TCGATGCACT GCTGATCGGC GGTGGCATGG CAAACACCTT TCTGCTTGCT CAGGGGCACG AGATGGGCGA CTCGCTGGTC GAGCCGGACT CCGCTCCCAT TGCGAAGTCC TTGCTGGATC AGGCGGCGCA ACGCGGCGTG CGCCTCATGC TGCCGACCGA CGTCGTAATT GCGGATGCCT TCAGCGCCGA TGCCAACCGC AAGGTTGTGC CGGTGGGCGA AATTCCGCCG GGCTGGCGCG CGCTGGATAT CGGGCCTGAA ACGATCCGCG CGTACACCGA GGTCATCACG GGCGCACAAA CCGTCATCTG GAATGGACCG ATGGGGGTGT TCGAACTGGC GCCATTTGCC GAGGGCACCC GAGCGATCGC ACAGGCAATG GCGAATTGCC CGGGGATGAC GATTATCGGC GGTGGCGACT CGGTTGCAGC GATAGAACAG ATGGGACTTG CCGATAAGAT TCGCCACATC TCGACCGGTG GCGGCGCGTC GCTGGAACTG CTGGAAGGGC GTATCCTGCC AGGCGTCGCA GCGCTGAATG ACGCATAA
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Protein sequence | MAKKTIRDID WSGKRALVRV DFNVPLENGQ ITDDTRIRAA LPTIRYLLEH GAAVILMSHL GRPKNKVVES MRLAPVVARL AELLPEAKAV KGSQATTGPA AEAAARDLKP GEVLVLENTR FDPREEANDE SMARELAKLG DVYVNDAFGS AHRAHASTEG VARFLPAVAG FLMEAELAAL QGALENPARP FVTIIGGAKI SDKIGVIENL LGKVDALLIG GGMANTFLLA QGHEMGDSLV EPDSAPIAKS LLDQAAQRGV RLMLPTDVVI ADAFSADANR KVVPVGEIPP GWRALDIGPE TIRAYTEVIT GAQTVIWNGP MGVFELAPFA EGTRAIAQAM ANCPGMTIIG GGDSVAAIEQ MGLADKIRHI STGGGASLEL LEGRILPGVA ALNDA
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