Gene Rcas_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2067 
Symbol 
ID5539547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2653459 
End bp2654313 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID640894202 
Producthypothetical protein 
Protein accessionYP_001432171 
Protein GI156742042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGA ATGATTTTGA TGACACGTTC CGCAACGTAT TGGCACGCAG CGGCGCGCTG 
GAGCATCACG AACCAACCGT CGATCTGGTG GCGTCCACGA TGCGTCGCCT GCCCAAAGCG
CCACCCCGCG TCGTTGCGCA GCGCGCGGCG GCGCGCCGGA TGCTCAGCCG CGCAGTAACA
CTCCTGGCAC TCGCGCTGCT GATTGTCCCG GCGACAACCG GCGCATTCAA TTTGATACGC
GGTGTTGAAA CCCCGATAGG AACCTTTGCC GGCGCTGCTG GTCAGGCGAA CATGCGCGCC
GCCCTGCTTG CAGCAACGGC TCAGCGTCTC GACCTTTCAT TGGTTCGCGG GCTGGTTGTG
GCATTGATCT GGCTGGCGCA GATGGCGGCG ATTGTGTTGG CCATCGGCTT TTGGCCCCGC
CGAAGCACAG CCGCAGGAAT GACCTTGCTG GCGGCGCCCC TGCGAGCACT GGGAACCGGT
TTGCTGGCAA TCGCTGCGTT GGGTGTTGTC CTTGCCCTAT TGCTGCCTCT GCTGACTGCC
ACTGTTATCG GGCTGCCGGT TGCTGCCGGG TTGGTGTTGT TGGCGCACGC GCCCGTCGTT
CTGGGCATCG CAGTGAGCGC GCGCGCCCTG GGGCTGCATC TTTCCGGGCA TCATCCACCC
CACGATTTTG ACCGAAACCT GATAGCCGCA GCCGCAGTGC TGGCGCTACC TGCCGCAATT
GCGGCACTCT TCTCTCTGCC GGCAGTGTTT CTGGCGCTCT ACCTGCTGTC AATGCCGGGC
ATCGGCGCCC TGGTTCGCAG TCAGGGGGGG ATGCGTCCGG TCCTCGCCGC TCACACCTCC
CACAACCTGC GCTGA
 
Protein sequence
MSSNDFDDTF RNVLARSGAL EHHEPTVDLV ASTMRRLPKA PPRVVAQRAA ARRMLSRAVT 
LLALALLIVP ATTGAFNLIR GVETPIGTFA GAAGQANMRA ALLAATAQRL DLSLVRGLVV
ALIWLAQMAA IVLAIGFWPR RSTAAGMTLL AAPLRALGTG LLAIAALGVV LALLLPLLTA
TVIGLPVAAG LVLLAHAPVV LGIAVSARAL GLHLSGHHPP HDFDRNLIAA AAVLALPAAI
AALFSLPAVF LALYLLSMPG IGALVRSQGG MRPVLAAHTS HNLR